Gene Sde_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0819 
Symbol 
ID3967717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1066453 
End bp1067439 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content51% 
IMG OID637919881 
Productcell division protein FtsA 
Protein accessionYP_526293 
Protein GI90020466 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000392808 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.759534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAT ACCAAATATA CGGCCTAGGC GCAGCGCTAG TAGATACTGA AATTGAAGTA 
ACAGACCTAG ACCTAAAGGA TTTACGCATT GATAAGGGTG TAATGACCTT GGTTGATGAA
GCCAGACAAG CGCAGCTTAT ACGCACCCTT TCCAAGCATG TTGCCGCATC TAAGCGCGCA
AGCGGTGGTT CGGCTGCCAA CAGCATTATT GCGGCAAGCT ATTTTGGCGC TAAAACGTTT
TATAGCTGCC GCGTCGCCAA TGACGAGAAC GGCAAGTTTT ACCTTAACGA CTTAGCCGAA
GCCGGTGTGA GCTATTACGA AAAGAATGGT GAACCGAGTG GCACCACCGG TAAATGCTTA
GTGTTTATTA CCCCAGACGC CGAGCGCACT ATGAACACCT TCTTGGGCAT TAGCGAAACA
CTATCGGTAG ATGATATTGA TGAGCAGGCA CTGGCTGAGT CTGAGTGGGC TTATATAGAA
GGTTACCTAG TAACATCGGC AACCGGCCGC CCAGCCGCAA TCAAGCTGCG CGAACTCGCC
GAGGCCAAAG GCGTTAAAAC AGCACTAAGC CTTTCCGACC CCGCCATTGT TAATTTCTTT
AAAGATGGAC TAGTAGAGAT GATTGGCGAC GGCGTAGACA TGCTGTTTTG CAACGAAGCC
GAAGCGCTGC AATACACCGG CTGCGATACC GTAGAAACAG CCGCAGAAGC GCTTAAGCAA
TGCGCCAAGG CCTTTGCCAT TACCCAAGGC GCCAAAGGCG CACTGCTATT TGATGGCGAG
CAGTTTATAA CGGTTGCGGC ACACAAGGTT ACCCCAGTGG ATACCAACGG AGCAGGCGAT
ATGTTTGCCG GTGCTTTTTT ATATGGCTTA ACCAACAACA TGAGCTTCCA ACAAGCTGGC
GACCTTGCTA GCAAAGCGGC CTCGGTAGTT GTATCTCAAT TTGGGCCGCG CCTGCGCCCA
GAACAACACA AAGAGCTGCT AGGCTAA
 
Protein sequence
MPTYQIYGLG AALVDTEIEV TDLDLKDLRI DKGVMTLVDE ARQAQLIRTL SKHVAASKRA 
SGGSAANSII AASYFGAKTF YSCRVANDEN GKFYLNDLAE AGVSYYEKNG EPSGTTGKCL
VFITPDAERT MNTFLGISET LSVDDIDEQA LAESEWAYIE GYLVTSATGR PAAIKLRELA
EAKGVKTALS LSDPAIVNFF KDGLVEMIGD GVDMLFCNEA EALQYTGCDT VETAAEALKQ
CAKAFAITQG AKGALLFDGE QFITVAAHKV TPVDTNGAGD MFAGAFLYGL TNNMSFQQAG
DLASKAASVV VSQFGPRLRP EQHKELLG