| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0813 |
|---|
| Symbol | |
|---|
| ID | 3967711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1059286 |
|---|
| End bp | 1059726 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637919875 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_526287 |
|---|
| Protein GI | 90020460 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TTCTGGTATT ACACGGCCCC AACCTCAACC TACTGGGCAC CCGCGAGCCA
GAAATATACG GCGCCACCAC GCTGGCTGAC ATCAATAGCA CGTTAACTGA AATGTGCATC
GCCAAAGGTC ACCACCTCCA AGCCCTACAA AGCAACGCCG AATACGAGCT AATTAACCGT
ATTCACGATG CCAAGGGTGA AGGTATTAAT TTTATTATTA TCAACCCAGC TGCCTTTACC
CACACCAGTG TTGCGCTGCG CGACGCACTT GCCGCGGTGG ATATTCCATT TATCGAATGC
CACCTTTCCA ATGTGCATAC TCGCGAAGCA TTCCGGCATC ATTCTTATTT TTCTGACTTG
GCACAAGGCG TTATTTGTGG CTTTGGTGCT CAAAGTTACG AGCTAGCCCT ACAGGCGGCT
TTTGCCAAGC TAGACAGTTA A
|
|---|
| Protein sequence | MATILVLHGP NLNLLGTREP EIYGATTLAD INSTLTEMCI AKGHHLQALQ SNAEYELINR
IHDAKGEGIN FIIINPAAFT HTSVALRDAL AAVDIPFIEC HLSNVHTREA FRHHSYFSDL
AQGVICGFGA QSYELALQAA FAKLDS
|
|---|
| |