| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0787 |
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| Symbol | |
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| ID | 3965840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1016256 |
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| End bp | 1017344 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919849 |
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| Product | Alpha-L-arabinofuranosidase |
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| Protein accession | YP_526261 |
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| Protein GI | 90020434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000245228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.585497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACCT TCATAATGGA TAAAAGCCAG CTACAAAGTG GTTTTGCGTT TAAAACAAGT
GGTTTTAACG TGCTGATTGT TGTCACATTT TTGGCATTGC TTGCAGCGCT TGTTGGCTGC
AGCAGCGCCA AGCTCGCACC CGTCGCCTCT CCTAGTTTAC CGCAGCCATT AGTGGCCCAA
CGGGCAGACC CTTGGGTGCA CAAGCACAGC GATGGTTATT ACTACTTTAT AGCAACGGTA
CCAGCATACG ACCGCTTAGA AATGCGTAGG GCCACAACCA TAGCAGGCTT ACGTAGCGCG
CCCGCTGTAG TGGTATGGCA GCGCAATACT ATTGGAGGTA TGAGCGCGAA TATTTGGGCG
CCCGAGCTGC ATTTTATTGA TGGTAAATGG TACATCTATG TAGCGGCTGC CACCGATCAC
AACAAGCCGT GGACAATTCG TATGCACACG CTTTCCAATG CATCGGCCAA CCCTATGCAA
GGTGAGTGGC AAGAAGAGGG GCGCTTTCAT ACACCGCTAG ATACTTTCTC GCTAGATGCC
ACAACCTTTG AGCACAGGGG TAAACGCTAT TTAGTATGGG CGCAACAGAA TGAAGCCCGT
ACTTATAACT CGGCGTTACT TATAGCGCAA ATGGATAGCC CTACAAGTAT TACTGGCCCC
ATTGTTACCT TAAGTGAACC GACATTACCG TGGGAAATTA TTGGCCATAA GGTTAATGAG
GGTGCGGCAG TAATTAAACA CGGTAAGCGT ATTTTTATAA GTTATTCCGC CAGTGCGACC
GATCATAACT ATGCGATGGG TTTGTTATGG GCAGACGAAA ACGCTGATTT GCTCGACGCA
GCAAGCTGGA CCAAGTCACC CGAGCCTGTA TTTTACTCAA ACGAACAATT AAAGCGCTTT
GGCCCTGGCC ATAATTGTTT TGTTAAAGCT GAAGATGGTG TTACCGATTT AATGGTGTAC
CACGCGCGTG ATTATAAAGA GATAGATGGT GAGCCATTGC GAGACCCAAA CCGCCACACG
CGGGTGCGCA AAGTGTATTG GGATGAACAG GGCATGCCGG ATTTTCGTCA ACATGAAGCA
GACCTATAG
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| Protein sequence | MSTFIMDKSQ LQSGFAFKTS GFNVLIVVTF LALLAALVGC SSAKLAPVAS PSLPQPLVAQ
RADPWVHKHS DGYYYFIATV PAYDRLEMRR ATTIAGLRSA PAVVVWQRNT IGGMSANIWA
PELHFIDGKW YIYVAAATDH NKPWTIRMHT LSNASANPMQ GEWQEEGRFH TPLDTFSLDA
TTFEHRGKRY LVWAQQNEAR TYNSALLIAQ MDSPTSITGP IVTLSEPTLP WEIIGHKVNE
GAAVIKHGKR IFISYSASAT DHNYAMGLLW ADENADLLDA ASWTKSPEPV FYSNEQLKRF
GPGHNCFVKA EDGVTDLMVY HARDYKEIDG EPLRDPNRHT RVRKVYWDEQ GMPDFRQHEA
DL
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