Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0778 |
Symbol | |
ID | 3965831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1003994 |
End bp | 1006405 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919840 |
Product | Acetyl-CoA carboxylase, biotin carboxylase |
Protein accession | YP_526252 |
Protein GI | 90020425 |
COG category | [S] Function unknown |
COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.163489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC AACCCTTTTT ACGTACTTTT GTTTTTGTAA TTACATTACA GGCATTTAGT TGGTGTAATG CTGCTGTAGC TTCTAAGCCG GTAGAGCTAT TCCCCCTTGC GGATGTACGA TTATTAGATA GCCCTTTTAA GCATGCGCAA GACAAAAATG TAGAATATGT TTTGGCCCTA CAGCCAGATA AATTATTGGC GCCATTTTTA AAAGAAGCTG GTTTGCCAGT AAAGGCAGAA AATTACGGTA ACTGGGAATC GCAAGGCCTA GACGGTCATA TTGGGGGCCA TTATTTAACC GCGTTAAGTT TGGCCTATGC CGCCACTGGC GATAAGCGTT TACTGGACCG CTTAAACTAT ATGCTCAACG AGCTTGAACG CGCGCAAAAT AAAAATAGCA ATGGTTATAT TGGTGGCGTG CGCAACGGCA AAGCGCTTTG GGATAATATT GCAAAGGGCG ACATTCGCGC AGATCTTTTT GCACTTAACG ATTACTGGGT GCCTTGGTAT AACCTGCATA AAATATACGC GGGCTTAAGA GATGCTTATA TCTATACCGG CAGCGAGCAA GCCAAAGCGA TGCTCATTGG CTTGGGCGAA TGGACTATAG CGCTTACTGC CGATTTAAAC GATGAGCAGA TAGAAAAAAT GTTAACCACT GAGTACGGTG GTATGAACGA AGTGTTTGCC GATATGGCCG CTATTACCGG CGATAAACGC TACCTTAGTT TGGCCAAACA ATTTTCCCAT AAAAAAATTC TTAACCCACT TCTACAAAAG CGCGATGCAC TTAATGGATT GCACGCAAAC ACACAAATTC CCAAGGTGGT TGGCTATCAG CGGGTGGCAG AGCTAACGGG CGATGAAGAA TGGCATAAAG CTGCAGATTA TTTCTGGCAT CACGTCGTAA ACAACCGCAC TGTCGCTATT GGCGGCAACA GTGTGCGCGA GCATTTTCAC GATAGCGAAG ACTTCGCCCC AATGATAAAC GATGTTGAGG GGCCAGAAAC CTGCAACACT TATAATATGC TGAAACTATC GCGCATGTTG TTTAGCGTTA ACCCCAGCGT AGATTATGTA GATTACTTTG AGCGGGCGCT GTACAACCAT ATATTATCGT CGCAGCACCC TGAAACGGGT GGCTTGGTGT ACTTTACGCC AATGCGCCCG CAGCACTATC GTATGTATTC CCAGGTGGAC ACTGCAATGT GGTGTTGTGT TGGCTCAGGT ATAGAAAATC ATGTTAAGTA CGGTGAGTTT ATTTATGCCA AGCAAAACAA TAACCTTTAC GTAAATCTAT TCATTGCTTC CACATTGGTG TGGCAAGAAA AGGGTGTGCA CTTAACACAA GAGAACACCT TCCCAGATAG CAATCGCACC ACGCTAACCG TGGCGCTAGA CAGCAAAGTA AAATCCTCCA AAAAACACGC AAAGTTTACG ATGCATATTC GTTACCCGCG CTGGGCGCAA GCCGGTAAAG TGGTTGTTAA AGTAAACGGC AAGCCAATAA ATGTAAAAGC AAAAGCTGGC GAATATATTG AAATTAATCG CCGCTGGCAC AATGGCGATA ACGTAGAGTT AAGTTTGCCT ATGAATATTG CGTTGGAGGC GCTACCCGAT CAATCAGATT ACTATGCCGT ACTTTACGGC CCCATTGTAT TGGCGGCCAA AACTCAGCCT TTTAAAAATG AACAATTGAA TGTTTTTGCC GACGAAAGCC GCATGGGGCA TATAGCCCAA GCGCAAATGT GTTCATTAGA CGCCGCCCCA ATTTTTGTGA GCGACAGCAG GGATTTTATA AATAAAATAA AGCGAATAAA TAGCGAGCAG CTAGTATTTA AAACGCAAGG CCTTATTCAA CCGGCTGCGC TTAGCCAGGT AGAACTTATT CCGTTCTTTA GGTTGCACGA TAGCCGCTAT ATGCTTTATT GGCCATACAG CTCGCCAGAT GATTTGCAAA AACGCCAGCA ATTGCAGGCG CAGGTAGAAG CAGAAAAACT GGCGTTAGCG CAACAAACCA TTGATAAAGT TGCACCTGGT GAGCAACAGC CGGAATCGGA TCACTTTTTT AAAGGTGAGG CAACCGAGGC TGGCGTACAC AGTGGCAAAC ACTGGCGTCA TGCACACCGT TGGTTTAGTT TTCAGCTTAA CGACCCAAAT AAAGAGGGTA AAATATTGCG TATTACCTAC TATGGTTTAG ATGCAGGGCG TAGCTTTAGT ATTTGGCTAG ATGATATAAA AGTAGCTGAC GTAACACTTA ATGGCGATAA GGGCGACGCT TTTTATAGTG TCGACTACAT GGTGCCTAAG CGTGTGCTTG CTCAAGCGAA AGCTGGCAAG TATCGCGTAA AATTCCAAGC CGAAGAGGGC AGCGTAGCGG GTGGTGTCTA CGGTGTTAGG TTAATGCGCT AG
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Protein sequence | MIKQPFLRTF VFVITLQAFS WCNAAVASKP VELFPLADVR LLDSPFKHAQ DKNVEYVLAL QPDKLLAPFL KEAGLPVKAE NYGNWESQGL DGHIGGHYLT ALSLAYAATG DKRLLDRLNY MLNELERAQN KNSNGYIGGV RNGKALWDNI AKGDIRADLF ALNDYWVPWY NLHKIYAGLR DAYIYTGSEQ AKAMLIGLGE WTIALTADLN DEQIEKMLTT EYGGMNEVFA DMAAITGDKR YLSLAKQFSH KKILNPLLQK RDALNGLHAN TQIPKVVGYQ RVAELTGDEE WHKAADYFWH HVVNNRTVAI GGNSVREHFH DSEDFAPMIN DVEGPETCNT YNMLKLSRML FSVNPSVDYV DYFERALYNH ILSSQHPETG GLVYFTPMRP QHYRMYSQVD TAMWCCVGSG IENHVKYGEF IYAKQNNNLY VNLFIASTLV WQEKGVHLTQ ENTFPDSNRT TLTVALDSKV KSSKKHAKFT MHIRYPRWAQ AGKVVVKVNG KPINVKAKAG EYIEINRRWH NGDNVELSLP MNIALEALPD QSDYYAVLYG PIVLAAKTQP FKNEQLNVFA DESRMGHIAQ AQMCSLDAAP IFVSDSRDFI NKIKRINSEQ LVFKTQGLIQ PAALSQVELI PFFRLHDSRY MLYWPYSSPD DLQKRQQLQA QVEAEKLALA QQTIDKVAPG EQQPESDHFF KGEATEAGVH SGKHWRHAHR WFSFQLNDPN KEGKILRITY YGLDAGRSFS IWLDDIKVAD VTLNGDKGDA FYSVDYMVPK RVLAQAKAGK YRVKFQAEEG SVAGGVYGVR LMR
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