| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0722 |
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| Symbol | |
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| ID | 3965282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 934653 |
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| End bp | 937055 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919784 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_526196 |
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| Protein GI | 90020369 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases
[COG3828] Uncharacterized protein conserved in bacteria
[COG4654] Cytochrome c551/c552 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTGC TCGTTACCGC CTGTGGGCAA GATAAATTCA ACAACGCCGC TGCAACCGAA
AAAAACGCTA AACGGGATGT AACTATTTTA GTGTTTAGCA AAACCACAGG TTACCGCCAC
GAATCTATAG AAACGGGTAT AGAAGCATTA AACACCATTG CCCGTAAAAA AGGCTACCGC
GTAATTGCCA CAGAAGATGC CAGTTATTTT GTGGATGAGA AATTAAAAAA TATTGATGCA
TTAGTGTTTT TAAACACAAC AGGCGATGTG TTAGATAACC TGCAACAAGT AGCAATGGAG
CGTTATATTC AAGCGGGCGG TGGCTTTGTG GGTGTGCACG CCGCGGCAGA TACTGAGTGG
AATGGTGACT GGTTTTGGTA TCGCAACCTT GTTGGCGGCG TATTTAAAAG CCACCCAGAT
ACCCCAAGCA ATGTGCAGCA GGCTAACGTA AGTGTTGTGG ATGCTAATTT TGCAGCAGGT
GAAGCGCTAC CCAAAACCTT TGCCCTTGCA GATGAGTGGT ATAACTTTCG CGACCTTTAT
GAATTTACCA ACCACATACT AACTGTAGAT GAGTCGAGCT ACCAAGGTGG CGAGCACGGC
GACTACCACC CCATTGCGTG GTACCACAAT TACGATGGTG GCCGCGCGTT TTATACCGGC
TTAGGGCATG CAAAAACTAC TTACAAAGAT GCAAACTTTT TAGCCCACTT GGAAGGCGGC
TTAGCTTACG CAATTGGCGA CGGTACACCT AAAAATTACA GCAATGTGCG CCCCTACGAT
ACCCAGCTTG AGCGCACCGT TTTGTTAGAC CATTTAAACG AGCCAATCTC TTTTGATTTT
TTGCCTAATG GCGATGTACT GCTGGCAGAG CGCCCCGGTA ACTTAAAAAT TATTGATGGC
AAAACCCATA AGGCAACTGA TTTAGGCTTC GCTAAAGATA TTGCGTTTTT ATCCCACGAA
GAAATGGGGT TGGTGGGCGT AGCCGTAGAC CCTAATTTTG CAACAACCGG TTGGGTGTAT
ACCTATTACA CGGCCTTTAC TAAAAGTAAC GACGTTATCG CACGAATAGC GCGCTTTGAT
GTTAAAAACC AAACCATTAA TTTTGATAAA CAAACCACGG TAATTGAATG GCCGGTAGAA
AAAAACTGTT GCCATATGGG GGGCGATTTA GCATTTACGC CAACCGGTGA ACTGTTTATT
GCAACTGGTG ATAACACCAG CCCGCGCGAT CAAGATGGTT TTAACCCGGT GGATTTTCGT
GAGGGCTTGC GCATGAATGA TGCTTTGCGC ACCTCGGGTA ACACCAACGA TTTGCGCGGT
AAAATATTGC GTATTAAACC CTTGCCTGAA GGCGGTTATG CCATTCCTAA GGGCAATTTA
TTTAGTCATG CGAACGAAGG CCGGCCAGAA ATTTACGCAA TGGGTACACG CAATGCGTTT
ACGCTTACCT ACGATGCAAA AACCGGCGAT GTATTTTACG GTGATGTAGG GCCAGATGCC
TCGGACGATA ACCCAATGCG CGGGCCGCGC GGGTACGACG AAATTAACCG CTTAACTGGC
CCTGCGCATA TGGGCTGGCC TTGGGTAATT GGCGATAACT ACCCCTACGT GAAATACGAT
TTTGTGGCCA AGCGCAGCAC GGGTGAAGTT TTTGACCCGC AACATTTAAT TAACTATTCG
CCCAATAACA CCGGTGCTAA AAAAGTGCCC GCCGCACAGG CACCGTTAAT TTGGTACCCC
TACGGTAATT CGGAGCAGTT CCCCGAAGTG GGTAGTGGCG GCCGCACCGC GCTGGTGGCC
GATGTATATC GCGCAGATCA GTTCCCTGCG GCCACGCGTT TGCCAGATTA TTACGATGGC
AAATTATTTA TTGTGGAATT TATGCGTAAC TGGGTGAAGG TAGTTACCTT TGATGAAAAT
AACGGCGTGC GAAAAATAGA GCCGTTCGCG CCGCAAATTA ACTATGTATT GCCCATTGAT
GCACGCTTTG GCCCAGATGG CGCGCTCTAT GTGTTGGAAT ACGGCTCGGC GTGGTTTAAA
GAAAACACCG ATGCGCAGCT AAGCCGTATT ACGTTTAACC CCAATAACCA AGCCGCCGCG
GTTACAGCGG TGCAAACCGA GGCAGCGGCG GGGCATCAGT TTGCCGATGT ACCCCATGCG
GGCGAAGCGC TGGCTAAAAA TAACGGTTGT ATGGCTTGCC ATAAGCTCGA TTCAGCCTCT
GTTGGCCCTG CGTTTAAGCA GGTAGCCGCT AAATACAAAG ATGACCCCAA TGCGGTGGCG
TACTTGGTAG ATAAAATCGC CAAGGGCGGC GGTGGCGTAT GGGGGCCTGC CTCTATGCCG
CCCTTTGCTT ACCTAGACGA AGCCTCCCGT CAAACCCTCG CCGAGTATGT GCTAAGCCGC
TAG
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| Protein sequence | MAVLVTACGQ DKFNNAAATE KNAKRDVTIL VFSKTTGYRH ESIETGIEAL NTIARKKGYR
VIATEDASYF VDEKLKNIDA LVFLNTTGDV LDNLQQVAME RYIQAGGGFV GVHAAADTEW
NGDWFWYRNL VGGVFKSHPD TPSNVQQANV SVVDANFAAG EALPKTFALA DEWYNFRDLY
EFTNHILTVD ESSYQGGEHG DYHPIAWYHN YDGGRAFYTG LGHAKTTYKD ANFLAHLEGG
LAYAIGDGTP KNYSNVRPYD TQLERTVLLD HLNEPISFDF LPNGDVLLAE RPGNLKIIDG
KTHKATDLGF AKDIAFLSHE EMGLVGVAVD PNFATTGWVY TYYTAFTKSN DVIARIARFD
VKNQTINFDK QTTVIEWPVE KNCCHMGGDL AFTPTGELFI ATGDNTSPRD QDGFNPVDFR
EGLRMNDALR TSGNTNDLRG KILRIKPLPE GGYAIPKGNL FSHANEGRPE IYAMGTRNAF
TLTYDAKTGD VFYGDVGPDA SDDNPMRGPR GYDEINRLTG PAHMGWPWVI GDNYPYVKYD
FVAKRSTGEV FDPQHLINYS PNNTGAKKVP AAQAPLIWYP YGNSEQFPEV GSGGRTALVA
DVYRADQFPA ATRLPDYYDG KLFIVEFMRN WVKVVTFDEN NGVRKIEPFA PQINYVLPID
ARFGPDGALY VLEYGSAWFK ENTDAQLSRI TFNPNNQAAA VTAVQTEAAA GHQFADVPHA
GEALAKNNGC MACHKLDSAS VGPAFKQVAA KYKDDPNAVA YLVDKIAKGG GGVWGPASMP
PFAYLDEASR QTLAEYVLSR
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