| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0720 |
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| Symbol | |
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| ID | 3965280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 931225 |
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| End bp | 932250 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637919782 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_526194 |
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| Protein GI | 90020367 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.292268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTT TGGGAATAGA AACCTCCTGC GATGAGACCG GTGTAGCTAT TTACGATAGT
GAAGCGGGCT TGCTTGGCCA CACCCTGTAC AGTCAGGTGG CGGTGCACGC CGAGTATGGT
GGCGTGGTGC CAGAGTTGGC CAGCCGCGAC CATGTGCGCA AGTTGTTGCC GTTGGTGGAT
GGTTTGCTAG ATAACACCGA CTCGCGCAAT AAAATAGATG CCATTGCTTA TACGTCTGGC
CCGGGGTTAA TTGGCGCGCT TTTGGTTGGC GCGTGTTTTG GCCGCGGTTT GGCAATGGCG
TGGGGTTGCC CCGCAATTGG CGTGCACCAT ATGGAAGGCC ATTTGCTGGC CCCAATGTTG
GAAGATGCTC CGCCGGCCTT CCCGTTTGTG GCGCTGTTGG TGTCGGGTGG CCACACCCAG
CTGGTAGAGG TGCAGGGCAT TGGTAAATAT GTGCTGTTGG GCGAGTCGCT AGATGATGCT
GCCGGTGAAG CCTTCGATAA AGCCGCCAAA ATGATGGATT TGGATTACCC CGGTGGGCCA
AATATTGCCA AGCTTGCTAC CAAGGGCGAT GTTTCGCGGT TTAAGTTTCC GCGCCCTATG
ACCGATCGCC CAGGGTTAGA TTTTAGTTTT AGTGGTTTGA AAACTTTTAC CCTTAATACC
GTTGCCAAGT ATGCAGATGA AACCGGCTTG CCGGACGATC AAACCTGCGC CGATATTGCC
TGCGCGTTTC AAGAAGCCGT GGTGGACACG TTAGTTATTA AATGCCGCCG CGCGCTGCAG
CAAACTAAAT TAAATACTTT GGTTATAGCC GGTGGTGTAT CGGCTAATGT TCGCCTGCGC
GAGCGTTTAG AAGCCGCTTT GGCAAAAATT AATTCACAGG TTTACTATGC TCGCCCAGAG
TTTTGCACCG ATAACGGCGC AATGATTGCC TACGCCGGTT GCCAGCGTTT GCTTGCGGGG
CAGGTAGAGC CGTTAGCTAT TAACGTTTCG CCGCGTTGGG CGCTAGATAC CTTGCCTGCT
ATTTAG
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| Protein sequence | MRVLGIETSC DETGVAIYDS EAGLLGHTLY SQVAVHAEYG GVVPELASRD HVRKLLPLVD
GLLDNTDSRN KIDAIAYTSG PGLIGALLVG ACFGRGLAMA WGCPAIGVHH MEGHLLAPML
EDAPPAFPFV ALLVSGGHTQ LVEVQGIGKY VLLGESLDDA AGEAFDKAAK MMDLDYPGGP
NIAKLATKGD VSRFKFPRPM TDRPGLDFSF SGLKTFTLNT VAKYADETGL PDDQTCADIA
CAFQEAVVDT LVIKCRRALQ QTKLNTLVIA GGVSANVRLR ERLEAALAKI NSQVYYARPE
FCTDNGAMIA YAGCQRLLAG QVEPLAINVS PRWALDTLPA I
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