Gene Sde_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0718 
Symbol 
ID3965278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp930006 
End bp930455 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID637919780 
Producthypothetical protein 
Protein accessionYP_526192 
Protein GI90020365 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00318634 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTG AACTAAAAAG CACAATAAGT AACGCTGTTA AAGACGCAAT GCGCGCAAAA 
GCAAAGGACC GCTTGGGCGT TTTACGTATG GTAATGGCAG AATTTAAACG CATTGAAGTT
GACGAGCGCA TAGAGCTCGA CGATGCACGT GTGCTTGCCG TATTGGATAA AATGGTTAAA
CAACGCCGCG ACTCTGCTAA ACAGTATGAA GAAGCCGGCC GCGAAGAACT TGCCGCTACC
GAACACGCCG AAATTGCTGT TATTTCTGAC TTTTTGCCCC AGGCATTAAC CGCCGAAGAA
ATAGCCCAAA TAGTTAACGA TGCCATTGCC TCTACCGGCG CAGCAGGCAT GGGCGACATG
GGTAAAGTGA TGGGCGTAGT AAAACCACAG GTACAAGGCC GTGCCGATAT GGGCGAAGTA
AGCAAGCTAG TTAAAGCCGC TTTCGCTTAA
 
Protein sequence
MASELKSTIS NAVKDAMRAK AKDRLGVLRM VMAEFKRIEV DERIELDDAR VLAVLDKMVK 
QRRDSAKQYE EAGREELAAT EHAEIAVISD FLPQALTAEE IAQIVNDAIA STGAAGMGDM
GKVMGVVKPQ VQGRADMGEV SKLVKAAFA