Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0718 |
Symbol | |
ID | 3965278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 930006 |
End bp | 930455 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919780 |
Product | hypothetical protein |
Protein accession | YP_526192 |
Protein GI | 90020365 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00318634 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGTG AACTAAAAAG CACAATAAGT AACGCTGTTA AAGACGCAAT GCGCGCAAAA GCAAAGGACC GCTTGGGCGT TTTACGTATG GTAATGGCAG AATTTAAACG CATTGAAGTT GACGAGCGCA TAGAGCTCGA CGATGCACGT GTGCTTGCCG TATTGGATAA AATGGTTAAA CAACGCCGCG ACTCTGCTAA ACAGTATGAA GAAGCCGGCC GCGAAGAACT TGCCGCTACC GAACACGCCG AAATTGCTGT TATTTCTGAC TTTTTGCCCC AGGCATTAAC CGCCGAAGAA ATAGCCCAAA TAGTTAACGA TGCCATTGCC TCTACCGGCG CAGCAGGCAT GGGCGACATG GGTAAAGTGA TGGGCGTAGT AAAACCACAG GTACAAGGCC GTGCCGATAT GGGCGAAGTA AGCAAGCTAG TTAAAGCCGC TTTCGCTTAA
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Protein sequence | MASELKSTIS NAVKDAMRAK AKDRLGVLRM VMAEFKRIEV DERIELDDAR VLAVLDKMVK QRRDSAKQYE EAGREELAAT EHAEIAVISD FLPQALTAEE IAQIVNDAIA STGAAGMGDM GKVMGVVKPQ VQGRADMGEV SKLVKAAFA
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