| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0696 |
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| Symbol | |
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| ID | 3966293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 899044 |
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| End bp | 901956 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919757 |
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| Product | hypothetical protein |
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| Protein accession | YP_526170 |
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| Protein GI | 90020343 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000664901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000149874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGACTATCA CGACTTTTCA ACCACTAGCC GCGCCTAAGC AAGCACGCTT TGGGCACTCA
AAAAAATTAC TTGCTGTACT TGTGGCTGCC GCTGCAATAC AAACCCCTAC TACATTTGCG
CAGGAAGAAT CGAGCAATCA GCTTGAAGAA GTAGTTGTAG TTGGTTCACT GCGCAACACT
ATGCGCAACT CTATCGAGAT TAAGCGCGAC GCAGAATCCA TTGTGGATGT TATCTCTGCG
GCAGAAATGG GCGCTCTGCC AGACCTTTCT GTAGCAGAAA CCCTGGAGCG TATTGTGGGT
GTAACCGGCG ACCGCTTTAA AGGCAATGCC AGTGAAATTT CTGTACGTGG CCTTGGCCCA
TTCTTAGGTT ATTCCACTTA TAACGGCCGC GAAATTTCAT CCGGTAGTGG TAACCGCTCT
GTTGCTTTCT CGCAATTTCC GTCAGAGCTA GTAAACGGCG CCGTTGTTTA TAAATCACAA
ACCGCCGACC TAGTTGAAGG TGGTGTTGCA GGCTTAATTA ACTTACAGAG CTTGCGCCCG
TTAGATTACG GTAAACGCCG CATTCAGGCC GAAGTTAAAG CCAACTACAA CGATTACGAT
GCGAAGCTAA ACGGCGACGA CGGTATTGGC TACCGCGGTT CTGTGTCGTA TACCGATATT
TTTGACACCG ACATAGGTGC CATTGGTGTA GCAATAGGTT ATGCCAGCCA CGACTCCTCT
ACCCCAGAAG AAAGCTACAA CACCAGCTCT AGCTTGCGCA ACTGTAACTC CGACTACTTT
GAAGACGGCG GCAGCAATTG CTCTTGGAGC GATAGCAATG CAGCCGCAAA TGGCGGTGCA
GCGGCAGACG GCGAATACTA TTTTATTCCC AATGCTTTTT ACTTCCGTCA GATGGAATCT
GAAGAAACTC GCGATGCGTT AATGGCAACC GTGCAGTGGC AGCCCAATGA CGATTTAAAT
ATTGTTGCCG ACGCGCAATG GTCCGACCGT TTTTACTACG AAGATCGCCA CGATTTATAT
TTTGATGATG GCCGTCGTCG CATTGGTAAC TGGACCACCA ACGACTCTGG CGCACTTACT
TCATACACTG GTGAATCGCG CGTAAGCACC TACGGCGAGT TCAGAGAGCG CGATGAAGTT
TATAAAGGTG CGGGCTTAAA CGTTGAGTGG CAAGTAAACG ACAAACTTAT TGTAGATGCC
GATATTTCTT ATTCCGATAC CGTGCGCTAC CAAGAAACCT GGCAAACACG TTTTAGATCA
GACCGCCTAT GGTATGACTT CGACACCGCT GGTGACTACG GCAGCAGCTG GCCAACCGTT
AGCTTGTACA CCGATAGCGA CGATGCAGCA AGTTCTGAGA TCGATTACAG CTTGCTAAAC
GATTACGACT TTTACGATGC AAACCAGCGT GCACGTTACG GCGAAGCAGA AGTAAACGAT
TCAATTAGTG CACTGGCAAT TAATGCCGAT TACTTATTAG AGGGCGACTT TATTACCTCT
ATAGAAGGCG GCATGCGTTT ATCTTCGCAC GAGCATAAAA ACTACGGCGA AGACCGCGTT
GAGTTTACCG CTACCGATCA CGCAGACATT ACCGATATAG CCTCTGGCTG TGCAACTGCC
TTCCCGCAAT CTGGTTTTGG TGACGATGCA GGCGGTAACC TCACCGAGTG GGCTACCTAC
GACACCCTGT GCGCATTCGA CCTAATGGTT GGCGACGAAG ATATGTCGTT AACCCCGGAA
GCAGCAAGCG CAGGCGATGT AATTCTTAGC GAAAATATTA ATTCTGCCTT CGCTAAGTTT
AACTTTAACA CCATGCTTGG CGGTGTTGAT GTTTCGGGTA ACTTTGGTGT TCGCGTTGTG
CAAACCAATG TTGAATCTGT TGGCTATCGC CAAGATTACA GCGTAGTAGC AAATGACGCA
GGCACACCTG CAGATACTTC GGACGATACT GTAACCATTA CCGAAACCGA TGGCACACTA
AAGAAAGAAG TTTACAACAA CGATTACATC AACGTATTAC CTAGCTTAAA CGTAAACTTT
ACGCTTAACG AGGAAGTGCA AATACGTACG GCTATTTACG GCGCAATTTC CCGCCCAGAT
ATGTGGTGGA TGGGCGCTGG TCGCGACCTA GACCTAGGTG ATGGCGAAGA AGATTTTGCA
AGCGTAGCAG AAGCCGTAGC GGCGGGTAAT GCCACAGCGC TGGGTAACCC CAACATGGAA
GCCATTGAAT CCATGAACTA CGATCTATCG GTTGCTTGGT ACCCATCTGA AGACACTATG
CTTTCTGCTG CGTTCTACTT TAAAGAGTTC GAAGCGGGCC TAGATGTTGC GGATTCCTCT
ACAGTACAAG AGTCGTTCAA TATTAACGGT ACCGACATCA CTATGGATGT GAACGGCTTA
ATTCAAAATA CCAGTGAGGC CTCTAACATT TCTGGTGTGG AACTAAGCTT GCAGCACGGC
TTTACCACCT TGCCACAACC TTTTGATGGC TTAGGTGTAA TGGCGGGCGC TAACTTTGCC
GATACCAACT TCGACTACTT CGAAAACGGA GTAGACATGA CCGACGACGT AGTGATTGCA
CCAGCAAGCT TGCCGGGCTT CTCTAAGCAA AGCTACAACG CAGAGGTGTA CTGGGAGAAA
TTCGGTATTA CTAGCCGTTT ATCTTACAAA TATCGTTCGG ACTACCTAAA ACCTTTCGGT
AGCGACTTTG GCCAAACTAA CCGCTTTGTA GAAGACACAA GCTCTGTAGA TTTATCGTTA
GCTTACAACG TAACTAAAAA TGTACAGCTT AAATTTCAAG CGCTTAACTT AACCAACGAG
CCTTACGCAG AATACCGCGT GACAGACGGT TCGTATAACC GCATTGAATA TAGCGGCACT
AAGTTCTTTG TTGGCGTACG CGTTAAACTG TAA
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| Protein sequence | MTITTFQPLA APKQARFGHS KKLLAVLVAA AAIQTPTTFA QEESSNQLEE VVVVGSLRNT
MRNSIEIKRD AESIVDVISA AEMGALPDLS VAETLERIVG VTGDRFKGNA SEISVRGLGP
FLGYSTYNGR EISSGSGNRS VAFSQFPSEL VNGAVVYKSQ TADLVEGGVA GLINLQSLRP
LDYGKRRIQA EVKANYNDYD AKLNGDDGIG YRGSVSYTDI FDTDIGAIGV AIGYASHDSS
TPEESYNTSS SLRNCNSDYF EDGGSNCSWS DSNAAANGGA AADGEYYFIP NAFYFRQMES
EETRDALMAT VQWQPNDDLN IVADAQWSDR FYYEDRHDLY FDDGRRRIGN WTTNDSGALT
SYTGESRVST YGEFRERDEV YKGAGLNVEW QVNDKLIVDA DISYSDTVRY QETWQTRFRS
DRLWYDFDTA GDYGSSWPTV SLYTDSDDAA SSEIDYSLLN DYDFYDANQR ARYGEAEVND
SISALAINAD YLLEGDFITS IEGGMRLSSH EHKNYGEDRV EFTATDHADI TDIASGCATA
FPQSGFGDDA GGNLTEWATY DTLCAFDLMV GDEDMSLTPE AASAGDVILS ENINSAFAKF
NFNTMLGGVD VSGNFGVRVV QTNVESVGYR QDYSVVANDA GTPADTSDDT VTITETDGTL
KKEVYNNDYI NVLPSLNVNF TLNEEVQIRT AIYGAISRPD MWWMGAGRDL DLGDGEEDFA
SVAEAVAAGN ATALGNPNME AIESMNYDLS VAWYPSEDTM LSAAFYFKEF EAGLDVADSS
TVQESFNING TDITMDVNGL IQNTSEASNI SGVELSLQHG FTTLPQPFDG LGVMAGANFA
DTNFDYFENG VDMTDDVVIA PASLPGFSKQ SYNAEVYWEK FGITSRLSYK YRSDYLKPFG
SDFGQTNRFV EDTSSVDLSL AYNVTKNVQL KFQALNLTNE PYAEYRVTDG SYNRIEYSGT
KFFVGVRVKL
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