| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0674 |
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| Symbol | |
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| ID | 3967648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 860927 |
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| End bp | 861220 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919735 |
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| Product | hypothetical protein |
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| Protein accession | YP_526148 |
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| Protein GI | 90020321 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3141] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000978777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000170908 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGTAA TCGCTGTTTG GAAATGTGAT CGGGATGGCA GTATGTTTGA AGACAAAAAA
CTAGCAGATG CGCACGATAA AATGCTGGAA TTAGCCGAGA GCATTACTCG CCTAATTGAA
GCTAACGTAC CCGGCGTAAG CGAAGCCGAC GTTGAGACCA TCGGCTTGCT TTTAGCAAAA
CGTAGCGACG ACCTAATCAA AGCCTGTAAA GGTAAGCCCG AAGTACTTTT GGCCAACCTT
GATGGCGACG CTGAAGATGA ATCTGCCAGC AATGTAACCT CACTTGCAGG CTAA
|
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| Protein sequence | MAVIAVWKCD RDGSMFEDKK LADAHDKMLE LAESITRLIE ANVPGVSEAD VETIGLLLAK
RSDDLIKACK GKPEVLLANL DGDAEDESAS NVTSLAG
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