| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0630 |
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| Symbol | |
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| ID | 3964959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 795727 |
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| End bp | 796770 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919691 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526104 |
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| Protein GI | 90020277 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.516446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTTATT CCATTCCCGC GTTAAGCGAT GCAATTTTAC CAAAGCTGCA ACACAAAGTT
GATACTAAAA CTAAGCCCCT AGGTGCCCTT GGTTTGCTAG AGAATCTAGC CGTTCAAATA
GGTTATATAC AGCAAACACT TACCCCCGCA ATTAATAAAC CGCACATGCT TGTGTTTGCG
GGTGATCACG GTGTTGCAAA TAGTGGTGTA AGCGCCTACC CGCAAGTTGT AACGCAACAA
ATGGTGCTAA ATTTTTTGGC TGGGGGGGCA GCTATCAATG TGTTTTGCGC ACAGCATGGT
ATTGCCTTAA AAATAATAGA TGCGGGCGTA AATGCCGAGT TGGCCGAGCA CCCTCTATTA
GTAAACGCCA AAGTTGCGCA CGGCACTAAT AATTATTTAG AGCAGGCTGC TATGAGTGTG
GCCCAATGCG AGCAAGCGTT GGCAAGCGGT AAAGTTCAGG TTGCTTCGGT TGCAGCGCAG
GGGTGCAATA CAATTGCCTT TGGTGAAATG GGTATTGGTA ATACATCCGC CGCAGCGCTA
TTAATGCATG TGCTTACCGG TGTGCCGCTA GACGAGTGTG TAGGTAAAGG CACGGGCTTG
GATGATGAGG GTGTTAAAAA TAAATTAGCG CTGTTACAAA AGGCAGCCAA TTTGCACAGC
TTGAGCGCGC AAAACCCAAT GGAGGCTTTG CGGTGTGTGG GCGGTTTAGA AATAGCGATG
ATGGTGGGTG CCTTTTTAGA GGCCGCGCGC CTGCAAATGG TTATTGTTGT GGATGGCTTT
ATTGCATCTG CAGCAGCGCT TGTTGCCGTG CATCTTTGCC CGCTGGTGTT GGAGTATTGT
ATTTTTAGCC ACTGTTCCGA TGAGCACGGC CACAAGCATA TGATTAACGC CTTAGGGGTT
ACACCTTTAT TGCAGTTGGG GTTGCGTTTG GGCGAGGGCT CGGGGGCAGC AGTCGCAATG
CCGTTGTTGC AATCTGCGGT GTTATTTTTA AATAAAATGG CATCGTTCGA AGCTGCTGGT
GTGTCGCAAG CAGAAGGTAA TTAA
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| Protein sequence | MSYSIPALSD AILPKLQHKV DTKTKPLGAL GLLENLAVQI GYIQQTLTPA INKPHMLVFA
GDHGVANSGV SAYPQVVTQQ MVLNFLAGGA AINVFCAQHG IALKIIDAGV NAELAEHPLL
VNAKVAHGTN NYLEQAAMSV AQCEQALASG KVQVASVAAQ GCNTIAFGEM GIGNTSAAAL
LMHVLTGVPL DECVGKGTGL DDEGVKNKLA LLQKAANLHS LSAQNPMEAL RCVGGLEIAM
MVGAFLEAAR LQMVIVVDGF IASAAALVAV HLCPLVLEYC IFSHCSDEHG HKHMINALGV
TPLLQLGLRL GEGSGAAVAM PLLQSAVLFL NKMASFEAAG VSQAEGN
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