| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0628 |
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| Symbol | |
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| ID | 3964957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 793004 |
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| End bp | 794920 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919689 |
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| Product | Outer membrane cobalamin receptor protein-like |
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| Protein accession | YP_526102 |
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| Protein GI | 90020275 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000288278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.81106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCTGC GTCTTAACTT TGCTGTTGTC GCGAGTCTAT CTTTTATTAG CACGCTTTGC
TGTGCCCCTG CTTTTGCAGA ATCTAATGCT AAAGAACAAT CTTTAGAAGA AATTATTGTA
GTAGCTAACC GTTCAGAAGT ACCTATTCGC CAAGTCGGGT CTACGGTTTC TGTGCTCACC
GAAGAAGATT TGGCCATTCG CCAAAACAGC CTGCTTGCCG ATACCCTGCG CAGCGTACCT
GGTGTGCAAG TTTCTCAAAG CGGTGGTTTA GGTAAAACAA CCAGCGTGCG TTTGCGCGGT
GAAGAGGCTC ATCGCACGTT ACTATTAATA GATGGCATAA ACGTAGCGGA TGCGAGCAGC
GTGCAAATCG CCCCGCATTT TGAAGACTTA CTAAGCAGCC AAATTGGCCG GGTAGAAATT
TTGCGTGGCC CGCAAGGTAT GATGTATGGC GCAGATGCAG GTGGTGTAGT AAGCCTGTCG
AGCAAAGCCT CAACTAAACC TTTTGAGGCA GACCTCGCGC TAGAAGGCGG TAGTTACAAA
ACCCATACTC AAGCGGGCAA TATTCGCGGT ACCACAGGTG CTTTAGGTTA TTCTTTAAGT
GCTAGCAACC TGTCTAACGA AGGTTTTAAC GTGCGTGAAG TTGATACCGA AAACGAAAAA
GATGGCTACC AAAATACCAC GCTACACGGT CGGTTTGGTG TTCAGCTAAC CGATAGTACT
GGCGTAGAGT TGGTGTTGCG CGACGTTGAC GCAGAAGCCG AGTTCGACGG ATGCGGCTGG
CCAACTTCGA TGGATTGCTT AGCTGAGTCG CAATCGCGCG CTTATCGAGT GGCTGTTCAT
TCTACTGAAG AAAAATATCA GCAGGTTGTA AGCCTATCTA AAAATACCAT TGAGCGCGCA
AATATAGGTC TTTCCGATGG CAGTGTTAGC CTAGATAGCC GCGGCGAAGT TTCGCAGCTA
CAGTATTTAG GCCGTTATCA TTTTAACAAT GTTTTGAAAT TTGTGTTTGG CGCAGATAGA
AAAGAAGAGG CTTTCTACAA CCTATTAAGC GAAGTAGAGC AAGATCGCGG TAATAATGGT
GTGTTTGTTG ATGCGCAGGT TTCTCTAACT GATTCGTTCT TTTACACCAT TGGTGCGCGC
CACGACGATA ACGAAGATTT TGGCCGGCAC ACAAGCTTAC GCTTAACGGG TGCTTATTTA
TTGCCAGTAA GCCACGGCGA GTTAAAATTA AAGGGTAGCT ACGGCACGGG TTTTCGCGCT
CCATCGCTGT ATGAAATTAA CTACAATAAC GGTAGTTATG TTGCAGAAGA CGCGCCAAAA
AGCTTTGTAG AAGAACAAAG TAAAGGTTTT GATTTTGGTT TGGAGTGGCA GCTAGCGGGC
GAAAGTTACA TTGAAGCCGT ATTGTTTAGC ACCACAATCG AAGATGAAAT ATATTTCGAT
TTGGCAAACT TCTGTTGTTA CTTACAAGAC GAAGGTGAAA CAGATTCAAA AGGGTTTGAA
CTTTCTGGTG CCTGGGAGCA GAGCGAGCAC TTATTGTTAG GGGCTAATTA CACCTACAAT
AGAACATCGC TGTCTGATAG CACCACACTA AGTGGCGCCA AGGGTGGTGA CCCGCGCGCG
CGCAGACCCA AACACATTGT TAACCTGTCG GCACAAACTT TCTGGTTAGA AAAGCGTTTG
CAGTTAGCCT TGTTTATGCG TTCTATCTCC AATAGTGTCG ATTACCCCTT TGGTGCCGAT
TCCGCGAAAG CGCTCGACGA TTACCAAGTG TTGGATTTTA GTGCGCGCTG GACATTCGAT
TCGACTGCGC AAGCCTATAT TCGCGCAAGT AATGTATTAG ACGAAAATTA TCAAGAAGTG
GATGGCTACA ACACGGCTGG CGCTTCGGCA TATATTGGTA TGCGTTTATC GTTCTAA
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| Protein sequence | MVLRLNFAVV ASLSFISTLC CAPAFAESNA KEQSLEEIIV VANRSEVPIR QVGSTVSVLT
EEDLAIRQNS LLADTLRSVP GVQVSQSGGL GKTTSVRLRG EEAHRTLLLI DGINVADASS
VQIAPHFEDL LSSQIGRVEI LRGPQGMMYG ADAGGVVSLS SKASTKPFEA DLALEGGSYK
THTQAGNIRG TTGALGYSLS ASNLSNEGFN VREVDTENEK DGYQNTTLHG RFGVQLTDST
GVELVLRDVD AEAEFDGCGW PTSMDCLAES QSRAYRVAVH STEEKYQQVV SLSKNTIERA
NIGLSDGSVS LDSRGEVSQL QYLGRYHFNN VLKFVFGADR KEEAFYNLLS EVEQDRGNNG
VFVDAQVSLT DSFFYTIGAR HDDNEDFGRH TSLRLTGAYL LPVSHGELKL KGSYGTGFRA
PSLYEINYNN GSYVAEDAPK SFVEEQSKGF DFGLEWQLAG ESYIEAVLFS TTIEDEIYFD
LANFCCYLQD EGETDSKGFE LSGAWEQSEH LLLGANYTYN RTSLSDSTTL SGAKGGDPRA
RRPKHIVNLS AQTFWLEKRL QLALFMRSIS NSVDYPFGAD SAKALDDYQV LDFSARWTFD
STAQAYIRAS NVLDENYQEV DGYNTAGASA YIGMRLSF
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