| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0602 |
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| Symbol | |
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| ID | 3965009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 755536 |
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| End bp | 760449 |
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| Gene Length | 4914 bp |
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| Protein Length | 1637 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919665 |
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| Product | 6-phosphogluconate dehydrogenase, decarboxylating |
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| Protein accession | YP_526078 |
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| Protein GI | 90020251 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.501993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAA AAGCGACATT GTTAGCGCTG GTAGTAACCT GCGCGGGGTG CTTCGACAGC
AATACCGACA ACAAACAGCC TAGTAACTCG GCGGGCGAGC CTGCTAACGC ATCGCTTTCA
TCCCAAAGCG CCGCAGCCAA ACCCAAAACA GCAGCCGAGT TGGCCAAACT TAAGCAAGAT
TTTGCTAAAA CCCCCTTCGA TGTTATGCAT ATTGCCGAGC TTAGCTATCA GCAGGCGCCT
GCCATTGCGG TTACCCTAAG TGCGCCAATA GACCCGCAAG CAAGCTGGCA AAACTATTTT
GAACTGCTCG ATAAGAATAG TTCGCCAATT AAAGGCGAAT GGATATTGGG CGAGCACTTA
AATGTTGTTT ACTTTCCTTT TACGCAGCCA AGCACCCAAT ACATCGTGCG TGTTAATTCG
GGCCTAAAAG GTTTATCTGG TCGTTTATTG GCTAGCGATG CGGAAAAACA GCTGCAAACT
CAGGCGCGTC AACAATCCGT TAAATTTGTA AGCCGTGGCT CGCAACTTGC GCCGCAACTA
AGCGAAGGGC TTACCGTTGA AGCGGTAAAC GTTAAAGCGG TAGATGTAGA TTTTTTACGT
TTAAATGACG ATGCAATAGG CGCGTTTTTA GCTGGCGGCT TAAGCAACTA TGCCTACGAT
TTACAGCGTT TAAAGCACAC AACCACCTTA GCCTACAGTG CGCGATTTGA CTTAAATAGC
AGCGAAAATA AAACAGAAAA AACCGTATTG CCACTTGCGG CTATAAAGCC GCTGCAAGAG
CCAGGCGTAT ATATCACGGT AATGAAAGAA GCTGGTGACT ACCCTTACAA CTACAATACA
ACTTGGTTTG CTGTTGGTGA TATAAGCGTG CAAGCGCGCC AATACCCCAA TCAATTAGTG
GCATTTGTGC ACTCTGCAGT AAAAGTAAAA CCCATTGCGC AAGCCACGGT AACCTTATAC
GACCAAGCGG GGCGAGAACT TGCCAAAGAG CGCGCCGATG CACAGGGCAA GGTAAGCTTT
GCCACGGCAA TGGATAAAGC CTCGTACCTT GTTGCGCAGC ACAACAAGCA TTTGTCTGTG
CTTACCCTAA AAGGCGCGGC CATGGATTTA TCTGAATTCT CGTTGGCTGC ACGTCAGAAC
TTTCCGTTAG AGTTTTTTAT GTATGGCCCG CGCGACATTT ACCGCCCAGG TGAAGAGGTC
ATAATCAACG GGTTGCTGCG CGATAACGAT GGCCGCTTAC TCGAAGCCAG CAATATACAG
GCGCGAATTT TGCGCCCAGA TGGCCGAGTG TTTCAAAATT TTGTATGGCA GGGCGATACT
CAAGCATTTT ATGAGCACCG CTTTTTATTG CCGCAGCAAA CGGTAACCGG TGATTGGCAG
CTCGCCGCCA AATTGGGTAA CGGCCGTGAA TTTACTTTTA CCTTTAAGGT AGAAGAATTT
TTACCCGAGC GCATGAAGCT CGCGTTAAGT GCCACGGCAA ACACGCATTT TATTCGCGAC
GAAAAGCTTA CTATTAATGT ACAGGGCGAC TACCTATACG GTGCACCTGC GGCGGGAAAT
CGCGCCGAAG CCACGCTGGT ACTGCGCCAA AAACGTAAAC TATTTGATGA ATGGCAAGGG
TTTGTTTTCG GCGCAGAAGA TTACAACAAC TTTAATACCG ATACTGCCTT AGATGATCTA
ACCCTTGATG ATAACGGTAG TGCAAGTATT ACCTTACCCG CTGAATGGCA AGGGGCGAGT
CAGCCAATTG AAATTAGCAC GCGGGTAAGT CTGTTTGAAA GCGGCGGCCG CCCAGTGAGC
CGCACCATTA ACCACACCTA CTGGCCGCGT GAAACGCTGG TGGGGGTGAG GCCACTGTGG
GATACCGAAA TAGCCAGCCC GCGCACCGAT GTGCAGTTAG AATTAATTAA CGTAAATACC
CAAGGCAAAT TGCAAGCGGC AGAAAACGTA ACCGTGGTTG CCATTCGCGA AAACGCCCGT
TACTACTGGC AGTGGGATGA CGGTTGGCAG TACCGCCAAA ACGAAACGAA TGTGCCGGTT
TATTCGCGTG TTATTTCTTT AAGTGCCGAA GAGCGCACTC AAGTTACTAT TCCGGTTGAA
TACGGCAACT ACCGCTTGGA AGTGCGCGAC CAACAGCAAA CACTATTAAA TAGCTACCGT
TTTTTCGCAG GCTGGCATTG GGATAGCCCA GAGGTAGGTG CAACAGGGCG GCCCGATAAA
CTCGACCTTA CCCTTAATGC GGATGCGATA GAAAATGGCC AGCAAGCCAC GCTTACTTTT
AATGCGCCCT ACGACGGGTT AATGGTGTTT ACCGTAGAGG CCAACGAATT AATGTGGTTA
GAAAGCCGCG AAATAAACGC GGGCGATAAT ACGCTAACCC TGCCGGTTAA TAACAATTGG
GATAGGCACG ATATTTATGC CACCGTCACC CTATTGCGCT CTGGTGATAG CCAGCGCAAA
TATTTACCTA AACGCGCCTT TGGTTTGGCC CATTTACCTT TAAATCGCGA TAACCGAAAG
TTAAGTGTAA GCATACACGC CCCCGAAAAA ATATTACCCG CCAGCGAACT CACCACAAAA
ATTAAAGTGG ATAACGCCGA AGGTAAACAA GTTTTTGTCA CGCTGTCTGC TGTGGATACA
GGGGTGCTTA GCCTAACCCA ATTTACAACC CCCAACGCCC ACAAATGGTT TTTTGCTGCG
CGTGGTTACA ATGTAGATAT TCGCGATACT TGGGCAGCCT TTATAGAGCA GCTAAGCGCG
CGCATGGCGA CGCGACGCTT TGGTGGCGAC GCGGATGAAA TGGCACGCGG CGGCGAAGCG
CCGCAAAGCG ATGTGCAAAT TGTGTCGCTT TACTCTGGCA AAGTGCAGTT AGATAGCAAT
GGCGAAGCCG ATGTAAACCT GAGTTTGCCC TACTTTAATG GTGAGTTACG GTTAATGGCC
ATGGCGTGGG CCGAAGGTGA TTTTGGCGAA CAAGAAGCGA AAGTAACCGT GGCCGCACCG
CTAATAGCAG AAATTAGCAC GCCGCGTTTT TTGGCTAAGG GCGACAAAGC CAATGCCACG
CTCGACTTGC AAAACTTAAC AGAGCGGGAA ATGCACTTAG ATGTTGAGTT TTCTGCAAGT
AATATTTTAG GTGCGGAAAA AATCACGCAA ACAATGTTAT TACAGCCGAA ACAAAAACAA
ATAGTGCAGT TGCCTTTATT GGGTATGGCC TATTACGGCA CCGGCAGCAT AGTGCTTAAG
GCTACCGAGC AATCGGCAGG CGGTGACGCC AGTGTTGCGC GCAGTTGGAA CCTTAGTTTG
CGCCCTGCGT TTCCAGCAGA AACTGTGCGC AACGAATCTG TGGTAAATGC TGGCGAAGCG
CTGCAATTCC CTATGCAAGA AGCGGCGCGT TTCGACGGCG ATACATTAAG CGTTATGCTC
AGCATGTCGC CCACGCCACC ATTCGATGTG CAGCAACAGT TGCATCAACT TATTCAATAC
CCCTATGGGT GTTTAGAGCA AACCACAAGT CGCGCTTGGC CGTTATTAAA AACGTCGTTC
GCCGAACTTA TGAAGTACGA CTTAACCGAC GATAAGCGCG TAGCTAAAAA CCGCGACCAA
CTTATTGAAG GCGCCATTGC GCGTATTAGC GGTATGCAAC GCAGCGATGG CAGTTTTGGT
TTGTGGAGTA ACCAAAGCCG CGAAGCCCAC TGGTTAACGG TATACGCCAC CGAATTTTTA
ATTGCGGCGA AAGACCAAGG CTTTAACGTA GATGATTCGG TATTAAACAG CGCCATTGCC
AAGGTTAAAA AATATGTAAC CCTGCATTCA ATTCAGTGGA GTGAGCGAGA GCATTACAGT
ACGTGGCCCG AGCACTATCA CTTTTCGTAT CGCGCTTATG CCGCTTACGT AATGGCGCAG
CGCCAGCAGG TTAGCTTAGG GGATGTGCGC AATTTATTTG ATCGCTACCA CGGTAGCGCC
AAAACACCGT TACCCTTAGC GCAAATAGCT GCGGCGTTAG AAACATTAGG GGACAAAGCG
CGCAGCGAAA AAGCGTGGGC TTTGGCATTT GCGCGCGATA AGCTTGCGCG CGGTTACGGT
GGCGATTACG CATCACCGGT GCGCGATCAA GCGTGGATAA CCGCACTGGC ATTAGATAGC
CGTTTAGTAA AAGAACCGCT GCAACTCGTT TTTACACTGC GCGATAGCGC GCGTTTGCGC
CGTTGGATAT CTACCCAAGA GCGATTTGCA CTGTACACGT TAGGGCAAAA ATTAAATCAG
CGAGAAACCC ATTGGCAAGC CAGTTTACAC GTTAACGATG CGCCTATAGC CATAGATCAA
TCAACCCCTT GGCGCGGTTA TTGGAAGCGC GAGGCCGTAC CCAGTGCGCT TACACTTACC
AATTCAGATA ACAAACCACT GTTCACCAAC CTTACTTTAC AGGGCTACCC AGTAGAGCCA
AATTACGATA TTGCCGAAGG CATACAGGTG CGACGCTTTT TCTACAATGA TCGCGGTGAG
GTTATTTCGC TTAACAACGT TAAAACTGGC GATTTAATTT TGGTGCGTGT AGATATGCAA
AGCACTGACG AGTACAGGCT GCCCGATGCC ATGCTGGTGG AGTTGCTACC TGCTGGTTTA
GAGTTAGAGA ATCAAAACCT AAGTTCTGCG GTTGCCATGC AAGATATGCG TGTACAAAAC
AAAACGGTGG CCCAGTGGAT GACAAACACA CCTATTGTGC ACCAAGAATT TAGAGACGAT
CGCTACGTAG CGGCTCTATC CCTAAGCCGT AAAACCGCAA GCGTATTTTA CTTGGCGCGC
GCAGTTACCC CTGGCGAATA CTTGGTGCCA CCCAGCTTAG TTGAAGATAT GTATCGCCCA
GAAATAAGAG CGGTAGGTGG CAAAGAAACA ACGCTAGTTA TTTCACCTAA GTAA
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| Protein sequence | MTVKATLLAL VVTCAGCFDS NTDNKQPSNS AGEPANASLS SQSAAAKPKT AAELAKLKQD
FAKTPFDVMH IAELSYQQAP AIAVTLSAPI DPQASWQNYF ELLDKNSSPI KGEWILGEHL
NVVYFPFTQP STQYIVRVNS GLKGLSGRLL ASDAEKQLQT QARQQSVKFV SRGSQLAPQL
SEGLTVEAVN VKAVDVDFLR LNDDAIGAFL AGGLSNYAYD LQRLKHTTTL AYSARFDLNS
SENKTEKTVL PLAAIKPLQE PGVYITVMKE AGDYPYNYNT TWFAVGDISV QARQYPNQLV
AFVHSAVKVK PIAQATVTLY DQAGRELAKE RADAQGKVSF ATAMDKASYL VAQHNKHLSV
LTLKGAAMDL SEFSLAARQN FPLEFFMYGP RDIYRPGEEV IINGLLRDND GRLLEASNIQ
ARILRPDGRV FQNFVWQGDT QAFYEHRFLL PQQTVTGDWQ LAAKLGNGRE FTFTFKVEEF
LPERMKLALS ATANTHFIRD EKLTINVQGD YLYGAPAAGN RAEATLVLRQ KRKLFDEWQG
FVFGAEDYNN FNTDTALDDL TLDDNGSASI TLPAEWQGAS QPIEISTRVS LFESGGRPVS
RTINHTYWPR ETLVGVRPLW DTEIASPRTD VQLELINVNT QGKLQAAENV TVVAIRENAR
YYWQWDDGWQ YRQNETNVPV YSRVISLSAE ERTQVTIPVE YGNYRLEVRD QQQTLLNSYR
FFAGWHWDSP EVGATGRPDK LDLTLNADAI ENGQQATLTF NAPYDGLMVF TVEANELMWL
ESREINAGDN TLTLPVNNNW DRHDIYATVT LLRSGDSQRK YLPKRAFGLA HLPLNRDNRK
LSVSIHAPEK ILPASELTTK IKVDNAEGKQ VFVTLSAVDT GVLSLTQFTT PNAHKWFFAA
RGYNVDIRDT WAAFIEQLSA RMATRRFGGD ADEMARGGEA PQSDVQIVSL YSGKVQLDSN
GEADVNLSLP YFNGELRLMA MAWAEGDFGE QEAKVTVAAP LIAEISTPRF LAKGDKANAT
LDLQNLTERE MHLDVEFSAS NILGAEKITQ TMLLQPKQKQ IVQLPLLGMA YYGTGSIVLK
ATEQSAGGDA SVARSWNLSL RPAFPAETVR NESVVNAGEA LQFPMQEAAR FDGDTLSVML
SMSPTPPFDV QQQLHQLIQY PYGCLEQTTS RAWPLLKTSF AELMKYDLTD DKRVAKNRDQ
LIEGAIARIS GMQRSDGSFG LWSNQSREAH WLTVYATEFL IAAKDQGFNV DDSVLNSAIA
KVKKYVTLHS IQWSEREHYS TWPEHYHFSY RAYAAYVMAQ RQQVSLGDVR NLFDRYHGSA
KTPLPLAQIA AALETLGDKA RSEKAWALAF ARDKLARGYG GDYASPVRDQ AWITALALDS
RLVKEPLQLV FTLRDSARLR RWISTQERFA LYTLGQKLNQ RETHWQASLH VNDAPIAIDQ
STPWRGYWKR EAVPSALTLT NSDNKPLFTN LTLQGYPVEP NYDIAEGIQV RRFFYNDRGE
VISLNNVKTG DLILVRVDMQ STDEYRLPDA MLVELLPAGL ELENQNLSSA VAMQDMRVQN
KTVAQWMTNT PIVHQEFRDD RYVAALSLSR KTASVFYLAR AVTPGEYLVP PSLVEDMYRP
EIRAVGGKET TLVISPK
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