Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0566 |
Symbol | |
ID | 3964857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 699570 |
End bp | 700118 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637919629 |
Product | hypothetical protein |
Protein accession | YP_526042 |
Protein GI | 90020215 |
COG category | [S] Function unknown |
COG ID | [COG4843] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000599705 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.489552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT GGTTAAATGT TGCACCCGAG TTATTGGCGT TACTTATATT TGTATCCCGT GTTATTGATG TTTCTTTAGG TACGTTTCGC ACGATTGTTA TTTTTAGGGG CTACAAAGCG CTTGCTGCCT TTATTGGTTT TTTTGAAATA ATGATTTGGC TAGTAGCCGC GGGGCAAGTA TTTAAAAATT TAGATCAATG GTACCTAGCG CTGGCGTACG CTGGTGGTTT TTCAATGGGT AACTATGTGG GCATGTGGAT AGAAAATAGG TTTGCCATTG GTAACGAGCT AGTGCGTTGT TTGTCGTTTA ACCGTGATGT GTTAGCCGAA AAAATAAGAG AGCAAGGTTT TAAGGTTATA TCTTTCGATG GCGATATGGG TACCGATAAG CTGGTAGAGT TGCTTTTTAT TGTAGAAAAA CGTCGTAATG TGCCCGCGCT TATTAAGCTT ATAAAAGAGT TAGATGCGAG CGCGGTTTAT TCTGTTTCAG ATGTTAAAAG TGTTTACGAA GGCCCAGAGC CGTTACCGCG TAGGCTATTT TTCAGGTAG
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Protein sequence | MNEWLNVAPE LLALLIFVSR VIDVSLGTFR TIVIFRGYKA LAAFIGFFEI MIWLVAAGQV FKNLDQWYLA LAYAGGFSMG NYVGMWIENR FAIGNELVRC LSFNRDVLAE KIREQGFKVI SFDGDMGTDK LVELLFIVEK RRNVPALIKL IKELDASAVY SVSDVKSVYE GPEPLPRRLF FR
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