Gene Sde_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0555 
Symbol 
ID3967898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp676046 
End bp676690 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content51% 
IMG OID637919618 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_526031 
Protein GI90020204 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.870987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCTG CCAAACAACC TAGCGTTAAA AAACGCCCCG CCAAACCTGC TACTAAAACA 
GCCGGCCCCG CGCAAGCCTG CCCTTGGTGC GGCAGCGACC CACTTTACGT GCACTATCAC 
GATACTGAAT GGGGTGTACC GGAATACGAT AACCAAGCCC TGCTAGCAAA ACTTATTCTA 
GATGGTGCGC AGGCAGGCTT AAGCTGGATA ACCATTCTAA AAAAGCGCGA CGGCTACTAC 
CGCGCCTTCG ATCAATTCAA CCCAGAAAAA ATGGCGCGTT ACACCGATGC CAAACTTGAA 
AAACTTATGC TCGATGAGGG CATAGTGCGC AATCGCTTAA AAATAAAAAG CGCCCGCCAA 
AACGCCCAAG CTTATTTACG CATAATGAAA AACGGCGGCC CCAACGGCGA AAAAGATTTC 
AGCGAATTTT TGTGGTCGTT TGTAGGCGGC CAACCCATCC AAAATAACTA CCACAGCATG 
AGCGACGTGC CGGCATACAG CCCAGAAGCC GAAGCCATGA GCAAAGCCCT AAAAAAAGCC 
GGCTTTAACT TTGTAGGCCC AACCATTGTG TACGCCTTTA TGCAGGCGGT GGGTATGGTG 
AACGATCACC TTGTGAGCTG CCCGCGACAT GCGGTGCTAT CTTAA
 
Protein sequence
MSAAKQPSVK KRPAKPATKT AGPAQACPWC GSDPLYVHYH DTEWGVPEYD NQALLAKLIL 
DGAQAGLSWI TILKKRDGYY RAFDQFNPEK MARYTDAKLE KLMLDEGIVR NRLKIKSARQ 
NAQAYLRIMK NGGPNGEKDF SEFLWSFVGG QPIQNNYHSM SDVPAYSPEA EAMSKALKKA 
GFNFVGPTIV YAFMQAVGMV NDHLVSCPRH AVLS