Gene Sde_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0536 
Symbol 
ID3968777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp657248 
End bp657769 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content49% 
IMG OID637919599 
Productcellulose-binding family II protein 
Protein accessionYP_526012 
Protein GI90020185 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCA AATTACATGA GCACGTGAGT ATTCCAATGA TTGTAGAAAA AGATACGGTA 
GTAAGCTTCC ATTACACCTT AAAAGAAAGC GGTGGTGCAG AGCTGGAATC GAATAAAGAC
GGCCTGCCAA TGGCTTATTT GCACGGCCAC GGCAATATTC TAACCGCCTT AGAAGAAGCC
CTTGTAGGCA TGAGCGAAGG CGAGCAAAAG CATATTACCC TATCGCCCGA GCAAGCCTAT
GGCGCGCGCC GCGAAAACGC CCAACAACGC GTACCTATCA AGCATTTGGT AGGTAAATAC
AAGCGCTTGC AACCCGGTAT GGTTGTGCGT GTGAATACCG AAAAAGGGAC GGTTAACGGC
AGAGTCATTA AAGTTGGCAA GTTCAATGTC GACCTAGACA TGAACCACCC ATTTGCAGGC
ATTACTTTAG AATTTGATGT AACTATCGAT AGCATTCGCG CAGCTAGCGA CGATGAAATT
GCCCACGGCC ACGCACACGG GCCAGGTGGG CATCATCATT AA
 
Protein sequence
MPAKLHEHVS IPMIVEKDTV VSFHYTLKES GGAELESNKD GLPMAYLHGH GNILTALEEA 
LVGMSEGEQK HITLSPEQAY GARRENAQQR VPIKHLVGKY KRLQPGMVVR VNTEKGTVNG
RVIKVGKFNV DLDMNHPFAG ITLEFDVTID SIRAASDDEI AHGHAHGPGG HHH