Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0536 |
Symbol | |
ID | 3968777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 657248 |
End bp | 657769 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919599 |
Product | cellulose-binding family II protein |
Protein accession | YP_526012 |
Protein GI | 90020185 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCA AATTACATGA GCACGTGAGT ATTCCAATGA TTGTAGAAAA AGATACGGTA GTAAGCTTCC ATTACACCTT AAAAGAAAGC GGTGGTGCAG AGCTGGAATC GAATAAAGAC GGCCTGCCAA TGGCTTATTT GCACGGCCAC GGCAATATTC TAACCGCCTT AGAAGAAGCC CTTGTAGGCA TGAGCGAAGG CGAGCAAAAG CATATTACCC TATCGCCCGA GCAAGCCTAT GGCGCGCGCC GCGAAAACGC CCAACAACGC GTACCTATCA AGCATTTGGT AGGTAAATAC AAGCGCTTGC AACCCGGTAT GGTTGTGCGT GTGAATACCG AAAAAGGGAC GGTTAACGGC AGAGTCATTA AAGTTGGCAA GTTCAATGTC GACCTAGACA TGAACCACCC ATTTGCAGGC ATTACTTTAG AATTTGATGT AACTATCGAT AGCATTCGCG CAGCTAGCGA CGATGAAATT GCCCACGGCC ACGCACACGG GCCAGGTGGG CATCATCATT AA
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Protein sequence | MPAKLHEHVS IPMIVEKDTV VSFHYTLKES GGAELESNKD GLPMAYLHGH GNILTALEEA LVGMSEGEQK HITLSPEQAY GARRENAQQR VPIKHLVGKY KRLQPGMVVR VNTEKGTVNG RVIKVGKFNV DLDMNHPFAG ITLEFDVTID SIRAASDDEI AHGHAHGPGG HHH
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