| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0519 |
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| Symbol | |
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| ID | 3968760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 639377 |
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| End bp | 642466 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919582 |
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| Product | putative CheA signal transduction histidine kinases |
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| Protein accession | YP_525995 |
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| Protein GI | 90020168 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC AACATTTAAC CGAAGAGCAG CAGGAGATTG TCGACCTGCT GCGCAATGAA
CTTGCCGACA TAATCGACTC AGGCATATCG CAGTTTGGGG CAACGCAAGA AACTGACGAT
AGAGTTTCCC TCGACGAACT CACCTTTCGC TTAGAGCATA TTGGCAACGC GTTAAATATG
GCAGGCATGA GCGGCCTCGC CAGTTGTGCT CATCACTTGC AACGCAATTT CGAGCAGGTA
GCGCAGCAAC AATTACAGGC CAACAGTGAC CAAGCGCTTA TTTGGAGCAG CTGGCCAGAA
AAAATGCTGG GCTATTTGCA GTATTTTTCT GATATACAAA AAGTTGCAGG GGCGGTGCAC
AGTTTACTCG ATCACCTGCA AAGTAACCTG TGGCCGGCCC CCCTTACTGA CGAAGAACGC
GGCGCGCTTA CTGAAGAGTT TTCTACATCG CATTTAGATT TGCCAGCAGA TGAAGACAAC
TTACCCGCAG TAATCACCCA AGAAATGGCA AGCTTGGTTA TCGGCGACGA TATACGCAAA
GACTTGCTCG ACGGCATGCT GCAAGAATTG CCCAAACAAG TGCAGCAGTT TGAACAGTCG
GTAGAAAATT ACTTAAAAAA TAAACAAACC GATGCACTCG CCCCCGCCCA ACGTACAGCG
CATACCGTTA AAGGTGCCGC CAACGTGGTG GGCGTTACTG GCCTCGCCAA CTTGATGCAC
TATATGGAAG ATTTGCTGGA AACAGTGGTG CGTAAGCCGG CCATGATGAC CAGCGACTTC
GATAATTTAT TACAAGACTC CGCAGACTGC TTGGCAATTT CTTCCGAGTA TCTTTGCGGC
ATGGGCTCTG CCCCCGATAA TATTTTCGAT ATTTTATGCC AACTACTAGA TTGGGTGCGC
AAACTAAAAG GCGAAAGTAG CAGTGCAAAA CAGCAAGAAG CGCTCGTCAC ACCTGCCAGC
GAGTCACAAC CAGCGGAACC CGAACTACCA GAGCCCGCTC AAACAGATAC AACACAAGAG
CTAGCCGAAG TAGAATTCGC TTTCTCGGAT GACGACCTCG CCCAATTAGA GGCGCAAGCA
CCGTTTAACA GCGAAGCCGA TTTGGCGGCC ATCGATTCCG AATTGGCAGT GCCCCCCGAA
GCACCTGCGG CAGAAGCAGC AGCTGAGAGC CCAGTCGCAC CGGCAACAGG CGAAACCAGT
GCAGTAGAAG CAACTACAAC TCCGCCTGCC GAAGATAGCG CCAGCGATGA GGAAGCCGAG
CAATTTCACT TATCGGTACC AGAAAATACC GCTCAGGAAT TACTGCGACT TTCCGGTGAA
TTGCACATCA ACAACACCCA GGTAATGGCG CAACTCGATA CGTTGTTAAG CAGCGCAGAG
TTAGCGGATA GATACCACAA ACGTATTCGC GCCATGTCGG CAGATTTAGA AGCACTGGTG
CAAACGCAAA GTGCACTGCG TGCGGCATCC ATGAAGTACG AGGATAACGA AATTGATCCT
CTTGAAATGG AACGCTACAG CGAACTACAT ACTTTCTCGC AACAATTACT TGAGCTTGCC
ACTGACTCCT ATGAAGCCAT CGAGCACATG GAAGATCAAA TTAAAGAAGT TGCCAGCTTA
AGTTATAGCC AAAAAATTCT TAACCAAGAA AACCAACGGC AACTATTAAA ACTGCGGCTG
GTACCTGTTT CTACTATGTC TTCTCGCTTT GCCCGCTGTG TGCGACAAGC GTCGCGATTA
ACAGGCAAAG CCGCGCGCTT AGAAATTAAA GGCGACGATT TACTTATAGA TAGCCGCGTA
CTATTTAGTA TTGCCGACCC TATTATGCAC CTGTTGCGCA ACGCCGTAGA CCACGGCTTA
GAAAGCAGCG CCCAACAGCG CGAAGCAAAC AATAAAGCTC CAGAAGGGTT AATTGTTTTA
AGCTTCCGCA GCGATGGTGA ATCCATTCGC ATCCAATGCC GCGATGACGG CAACGGTCTA
GATTACAAAA AAATTCATGC AACAGCCGCT CGCAAAGGGC TTATTGAAGC AAGCACCCCG
CTTACCGAAC AACAAATGGC AAACTTAGTG TTACTTGCGG GCTTCTCCAC CCGCGCAGAA
GTAAGCCAAA CCTCCGGTCG CGGCATAGGC CTAGACGCCG TACAAGAGGA AGTACGCAAA
CTCAAGGGCA CCATGAGCAT TGTATCTACC CGCGGCGAAG GTTGTTGCTT TAATATCGAC
GTACCTTCTT CTATTCTCAC CGGTCACGCG CTGCTCGTAC GCAGCCACGG TCGCACACAA
AATGTTGTAT ACGGTTTAGT TACACGCAGC ATTCAAAGTA TTGTTTACAC AAGCGCCGAC
GAACTTATTT ATCGCAGCGG CCATTACTAC TACGTGTTAG ATGAAAAAGA AATTCCGGTA
TATACGCTCG ACGAGCTTAT GGGCCGCTCC GAGCAAGATA TAAAACTGAC TAGCTCGCTA
ATTATTTGCG CCAAGCCGGA CGGCACACAC GCCGCAGTTG CCGTGCAAAC TCTGCTTGCC
AGTGAAGACT TGGTAATTAA ACCGCTTAAT AAATTTAGCT ACCACCCTGA AGGTGTGGTG
GGCGCAACCA TTCTTGGGGA CGGCTCCGTC GCACCGGTGG TAGATTTGCT CGAACTACCG
GCTATGCACC TATCACAACA AGAAATTGAG CAGCAGCGTT TGCAACGCGC ACGTATTGCC
GCGTTAGAAG CAGAAAACTA CAAAGCCCCA CTTAGCGCTT TAATTGTCGA CGACTCCCTG
AGCGCGCGAC GCACCCTAGC GCAGTTTATT TCCGATATGG GAATGGAAGC CTATACTGCC
AAAGACGGCT TCGATGCGAT TAACGTATTA AAAGATAAAA AGCCCAGCAT TATGCTAGTG
GATTTGGAAA TGCCACGCAT GAACGGCTTA GAACTCACCG CGCATTTGCG TTCGCGGGAA
GATACGCGCA ACATACCGGT GATAATGATC ACCTCGCGAA CCACCGAAAA ACACCGCACC
ATGGCGAAAA ATGCTGGCGT GGATACATAT TTAAATAAAC CCTGGTCGGA TGAAGAGTTG
CTCTCTACAA TTCAAAAAGA AATCGCTTAA
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| Protein sequence | MTTQHLTEEQ QEIVDLLRNE LADIIDSGIS QFGATQETDD RVSLDELTFR LEHIGNALNM
AGMSGLASCA HHLQRNFEQV AQQQLQANSD QALIWSSWPE KMLGYLQYFS DIQKVAGAVH
SLLDHLQSNL WPAPLTDEER GALTEEFSTS HLDLPADEDN LPAVITQEMA SLVIGDDIRK
DLLDGMLQEL PKQVQQFEQS VENYLKNKQT DALAPAQRTA HTVKGAANVV GVTGLANLMH
YMEDLLETVV RKPAMMTSDF DNLLQDSADC LAISSEYLCG MGSAPDNIFD ILCQLLDWVR
KLKGESSSAK QQEALVTPAS ESQPAEPELP EPAQTDTTQE LAEVEFAFSD DDLAQLEAQA
PFNSEADLAA IDSELAVPPE APAAEAAAES PVAPATGETS AVEATTTPPA EDSASDEEAE
QFHLSVPENT AQELLRLSGE LHINNTQVMA QLDTLLSSAE LADRYHKRIR AMSADLEALV
QTQSALRAAS MKYEDNEIDP LEMERYSELH TFSQQLLELA TDSYEAIEHM EDQIKEVASL
SYSQKILNQE NQRQLLKLRL VPVSTMSSRF ARCVRQASRL TGKAARLEIK GDDLLIDSRV
LFSIADPIMH LLRNAVDHGL ESSAQQREAN NKAPEGLIVL SFRSDGESIR IQCRDDGNGL
DYKKIHATAA RKGLIEASTP LTEQQMANLV LLAGFSTRAE VSQTSGRGIG LDAVQEEVRK
LKGTMSIVST RGEGCCFNID VPSSILTGHA LLVRSHGRTQ NVVYGLVTRS IQSIVYTSAD
ELIYRSGHYY YVLDEKEIPV YTLDELMGRS EQDIKLTSSL IICAKPDGTH AAVAVQTLLA
SEDLVIKPLN KFSYHPEGVV GATILGDGSV APVVDLLELP AMHLSQQEIE QQRLQRARIA
ALEAENYKAP LSALIVDDSL SARRTLAQFI SDMGMEAYTA KDGFDAINVL KDKKPSIMLV
DLEMPRMNGL ELTAHLRSRE DTRNIPVIMI TSRTTEKHRT MAKNAGVDTY LNKPWSDEEL
LSTIQKEIA
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