| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0499 |
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| Symbol | |
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| ID | 3966057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 610853 |
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| End bp | 612274 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637919562 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525975 |
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| Protein GI | 90020148 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.021061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAC CAAACTTGGT GTGGATTATT GACGATGACC GCTCTATTCG CTGGGTTCTT
GAAAAAGCGC TGCAGCAGGC CGGCATTACT ACCACCAGCT TCGAGTCTGG CGATAAGGCC
GTTGAGCACC TCGCGCAGGA AAAACCCGAT GTCGTGATTA GCGACGTGCG CATGCCCGGC
ATGAATGGCC TCACCCTGCT TACCCATTTG CACAAAGAAA TACCGAACCT GCCCGTAATA
ATTATGACGG CGCACTCGGA TTTAGACAGT GCCGTAGCAG CCTACCAAGG CGGTGCATTT
GAATACCTGC CCAAACCATT CGACGTAGAT GAAGCGGTAG CAGTCACCCA GCGTGCGCTC
TCGCACGCCC AGGAGCAACG CGTAGAAGCA CCAGCGGCGC AACCTGCCGT AGATACAGAA
ATTATTGGTG AAGCGCCAGC CATGCAAGAA GTGTTTCGCG CAATTGGCCG CTTATCACAA
TCCAATATTA CGGTATTAAT TAACGGTGAA TCAGGTACGG GTAAAGAGCT TGTCGCTCAC
GCCCTGCACA AGCACAGCCC GCGCCGCGAA GGCCAGTTTA TTGCGCTTAA CATGGCGGCT
ATACCGCGCG ACTTAATTGA ATCGGAATTA TTCGGCCACG AAAAAGGCGC GTTTACTGGT
GCAGGCGCAC AGCGCCAAGG TCGCTTCCAG CAAGCCGATG GCGGCACACT GTTCTTAGAT
GAAATTGGTG ATATGCCCGC AGAAACACAA ACCCGCTTAC TGCGCGTATT GGCCGATGGC
GAATTTTACC GCGTGGGCGG CCACACCCCC ATCAAAGTAG ATGTGCGCAT TATTGCGGCC
ACCCACCAAA ACCTAGAAGG GCTGGTTGAA GAAAACCGTT TCCGCGAGGA TTTATTCCAC
CGCTTAAACG TAATTCGCAT CCACCTACCT AAAATGGCGG ATCGCCGCGA AGATATTCCA
AAGCTAGCGC AGCACTTTTT GCGCCGCGCC GCCGAAGAGC TCGGGGTAGA ACCAAAAACC
CTTACCCCCG AAACCGAAGC TTACCTCAGC CACTTATCTT GGCCTGGTAA CGTACGCCAG
CTAGAAAACA CCTGTCGCTG GATAACCGTA ATGGCTTCAG GCCGCGAAGT GCATATTGCC
GACCTGCCAC CAGAACTAAT GGAAGCCAGA ACGGCAGAAG CGCCAAGTGG CGACTGGGAA
AAGGCTCTGC GCCACTGGGC CGATCAAGCC TTGGCCTGTG GCCAAAGCGA TATTCTTTCT
GATGCCGTGC CCACCTTTGA GCGCGCATTA ATAGAAACCG CCCTCAAACA CACTGCCGGC
AGAAAACGCG ATGCAGCAAA CCTTTTAGGC TGGGGGCGCA ACACGCTCAC GCGCAAACTA
AAAGAGTTGG GTATGGCCTC CTCGGAAGAA GAAGTCGAAT AA
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| Protein sequence | MHKPNLVWII DDDRSIRWVL EKALQQAGIT TTSFESGDKA VEHLAQEKPD VVISDVRMPG
MNGLTLLTHL HKEIPNLPVI IMTAHSDLDS AVAAYQGGAF EYLPKPFDVD EAVAVTQRAL
SHAQEQRVEA PAAQPAVDTE IIGEAPAMQE VFRAIGRLSQ SNITVLINGE SGTGKELVAH
ALHKHSPRRE GQFIALNMAA IPRDLIESEL FGHEKGAFTG AGAQRQGRFQ QADGGTLFLD
EIGDMPAETQ TRLLRVLADG EFYRVGGHTP IKVDVRIIAA THQNLEGLVE ENRFREDLFH
RLNVIRIHLP KMADRREDIP KLAQHFLRRA AEELGVEPKT LTPETEAYLS HLSWPGNVRQ
LENTCRWITV MASGREVHIA DLPPELMEAR TAEAPSGDWE KALRHWADQA LACGQSDILS
DAVPTFERAL IETALKHTAG RKRDAANLLG WGRNTLTRKL KELGMASSEE EVE
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