Gene Sde_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0494 
Symbol 
ID3966052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp606837 
End bp608387 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content52% 
IMG OID637919557 
Productphosphoglyceromutase 
Protein accessionYP_525970 
Protein GI90020143 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG TAAAAAAGCC CCTTGCCCTA ATCATTCTTG ATGGATTCGG CTACTCCGAG 
TCAGATAAAT ACAACGCCAT CAACGCAGCT AAGGCCCCAA CTTGGCGTAA AATTTGGGCC
GAAAACCCCA AAACGACCAT TGCCACATCC GGTATGGCGG TAGGCCTACC CGAAGGCCAA
ATGGGCAACT CCGAAGTGGG CCACATGACT CTAGGCGCGG GCCGCGTGGT GTACCAAAAC
TTCACTCGTA TTAACAAAGC CATTGCCGAT GGTGATTTTT ACACCAACCC CGTATACACC
AAAGCGGTAG ACGACGCGCA AAGCCAGGGC AAAGCAGTAC ACGTAATAGG CCTGCTTTCA
GACGGCGGCG TACACAGCCA CGAAGACCAC ATGATTGCCA TGATGGAACT GGCCGTTAAA
CGCGGTGCAG AAAAAGTGTA CATGCACGCC TTTTTAGATG GCCGCGATAC CCCACCGCGC
AGCGCCAAAG CGCCGCTGCA AAAAACAGAA GAAAAACTTA AAGCCCTTGG CGGCGGTAAA
ATTGCCAGCA TTATTGGCCG CTTCTTTGCG CTCGACCGCG ACAACCGCTG GGACCGCGTG
CAACAAGCCT TCGACCTAAT GGTAGATGGC AAAGCTGCCT TTACCGCCCA ATCCGCCACT
GCCGGTTTAG AGGCGGCGTA CGAGCGCGAC GAAAATGACG AGTTTGTTAA AGCCACCGCA
ATAGTGGATG CAGACGGCAA GCCGGTAACT ATTGAGGATG GCGATGCGGT TATTTTCATG
AACTTCCGAC CAGATCGCGC GCGTCAGCTT ACCAATGCGT TTGTAGATAA AAACTTCGAC
GGCTTTGCTC GCGCCCGCGT GCCAGCGCTA TCGGATTTTG TAATGACTAC CGAGTACTCC
GCCGACATAG ACACCAGCTG CGCCTACCCG CCAGAAGATT TAGTTAACTC CTTCGGCGAA
GTGATGGCTA AAAACGGCAA GAAGCAATTG CGCATTGCCG AAACCGAAAA ATACGCTCAC
GTAACATTCT TCTTTAGCGG CGGTCAGGAA TCATTGTACG AAGGTGAAGA CCGTATATTG
GTGCCTTCAC CACAGGTGGA AACCTACGAT GAACAACCAG AAATGAGTGC GCCAGAAGTC
ACCGCCAAAC TTGTAGATGC AATTGAAAAC GGCGGCTACG ATGCCATTAT TTGCAACTAC
GCAAACTGCG ACCAAGTAGG TCACACCGGC GATTTCGACG CATCGGTTAA AGCTGTAGAA
GCGGTAGATG CTGCGCTTGC AGAAGTATTC GCAGCCTTAG AGCGAGTGGG CGGCGAAGCG
CTTATCACTG CAGACCACGG CAACGTAGAG CTTATGTACG ACGACGAAGC CCAGCAGCTG
CACACGCAGC ACACCACCCT GCCAGTACCT TTGGTTTATG TGGGCAAGCG CGATATTAGC
CTTGAACAAG GTGGCAGCCT CGCAGACATA GCCCCGACTA TGTTAGCCTT GCTGGATGTT
CCGCAACCTA CAGAAATGAA TGGCCGCAAT CTTGTTAAAT TCAGCAAGTA A
 
Protein sequence
MSEVKKPLAL IILDGFGYSE SDKYNAINAA KAPTWRKIWA ENPKTTIATS GMAVGLPEGQ 
MGNSEVGHMT LGAGRVVYQN FTRINKAIAD GDFYTNPVYT KAVDDAQSQG KAVHVIGLLS
DGGVHSHEDH MIAMMELAVK RGAEKVYMHA FLDGRDTPPR SAKAPLQKTE EKLKALGGGK
IASIIGRFFA LDRDNRWDRV QQAFDLMVDG KAAFTAQSAT AGLEAAYERD ENDEFVKATA
IVDADGKPVT IEDGDAVIFM NFRPDRARQL TNAFVDKNFD GFARARVPAL SDFVMTTEYS
ADIDTSCAYP PEDLVNSFGE VMAKNGKKQL RIAETEKYAH VTFFFSGGQE SLYEGEDRIL
VPSPQVETYD EQPEMSAPEV TAKLVDAIEN GGYDAIICNY ANCDQVGHTG DFDASVKAVE
AVDAALAEVF AALERVGGEA LITADHGNVE LMYDDEAQQL HTQHTTLPVP LVYVGKRDIS
LEQGGSLADI APTMLALLDV PQPTEMNGRN LVKFSK