Gene Sde_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0487 
SymbolhisB 
ID3966045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp599325 
End bp599918 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID637919550 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_525963 
Protein GI90020136 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC GTAAGGCACA AGTCAGCCGC GACACATTAG AGACTCAAAT TTCGGTTGAG 
CTTAATCTGG ATGGTACCGG AACCGGTAAG TTCAACACGG GAGTGCCCTT TTTAGAGCAC
ATGATGGACC AGATTGCGCG CCATGGTTTT ATTGACCTAG ACGTAACCTG TAAAGGCGAC
ACCTACATTG ATGATCACCA CAGTGTAGAA GATATAGGTA TTACTATTGG CCAAGCTATG
GCTAAAGCTG TGGGCGATAA GCGCGGTATT CGCCGCTATG GCCACGCCTA TGTACCTCTC
GACGAAGCGC TTTCGCGCGT GGTTATCGAT TTTTCGGGTC GTCCAGGCCT TATTATGAAC
ATCCCATTCA CCCAAAAACG TATTGGTAAA TTTGATACCG AGCTATTTTG GGAGTTTTTC
CAAGGTTTTG TTAACCACGC GGGTGTGACT TTGCATGTGG ATTGCTTGCG CGGCGAGAAT
GCGCACCACC AGATCGAAAC AGTGTTTAAA GCCTTTGGCC GCAGTTTGCG TATGGCGTTA
GAGCGCGACG AGCGTTTAGG CGATGCTATG CCATCAACCA AAGGTACGCT CTAG
 
Protein sequence
MADRKAQVSR DTLETQISVE LNLDGTGTGK FNTGVPFLEH MMDQIARHGF IDLDVTCKGD 
TYIDDHHSVE DIGITIGQAM AKAVGDKRGI RRYGHAYVPL DEALSRVVID FSGRPGLIMN
IPFTQKRIGK FDTELFWEFF QGFVNHAGVT LHVDCLRGEN AHHQIETVFK AFGRSLRMAL
ERDERLGDAM PSTKGTL