Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0403 |
Symbol | |
ID | 3965979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 499317 |
End bp | 500303 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919466 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport system protein |
Protein accession | YP_525879 |
Protein GI | 90020052 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTTA ACGCAATGCC AAAACGACTC CTAAGCATGA AAGCTGTTGC AGCTGCCCTG CTTGTTTTAG TGTTGGGTGC GTGTTCCCGC AATGAGATGC AGCAGCTTTC CATTGCCATA AACCCCTGGC CCGGTTACGA GTTGCTGTAT TTGGCGCAAG AGCAGGGTTT TTTTCACGAG CTGGGGTTGG ATGTGCGCTT AGTGGAGCTT AACTCGCTTA GTGATGCGCA GCGCGCTTAT ATGTCGGGGC AGGTTGACGG CTTAACATCC ACCTTGGTGG AAGCCGTACT TATTCAAGTT GATTCCGCTT ACCCGTTGCA GGTGGTTATT CCCACCGACT ACAGCAACGG CGGCGATGTT ATTTTGGCGC AGGCCGGCAT CACAAGTTTA ACCGAGCTAA AAGGTAAGCG GGTGGGCTGC GAAGCCAACA GTTTGGGTAT ACACGTTTTA TACCACGCGC TTCGGCGGGT TGGTTTATCC CTGAGCGACG TAGAGGTGGT AAATGTGGGG CAGTCACAGG GGAGCGAAGA GCTGGCACTG GGTGTGCTAG ATGCACTTGT TACCTACCCG CCAACGTCTA TAGAGGCCCT AAAGGCGGAA GGTGTGCATA AGCTATTCAC TTCGCGTGAA GCGCCAGAAG AGATACTCGA TGTGCTATCT ATCAAACAGT CGGTGCTTGA GCGCTACCCG GCGCTACCTC AGCAGTTGTT AGCCGTTTGG CAACGCGCTT ACGAATATAC AGAGCAACAC CCCAAACAGG CATTTGCCAT TATGGCGGAG CGAGAACAAG TTTCAGTAGA AGAATTTGAA ACAATGTTCA ACAACGAAAT ACATGTATTT GATAAAGATG GCGCACTACA AATATTGCGC GATTGGTCGT CGCTAACCAA CAAATTAATG GAAACCTGCG AAGTGTTAAA AGAAATTAAT CAACATAACA GCAATTGCTC GCGCGTGCAT ACGATGGTGA ATCGTGAGAT GTTTTAA
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Protein sequence | MMFNAMPKRL LSMKAVAAAL LVLVLGACSR NEMQQLSIAI NPWPGYELLY LAQEQGFFHE LGLDVRLVEL NSLSDAQRAY MSGQVDGLTS TLVEAVLIQV DSAYPLQVVI PTDYSNGGDV ILAQAGITSL TELKGKRVGC EANSLGIHVL YHALRRVGLS LSDVEVVNVG QSQGSEELAL GVLDALVTYP PTSIEALKAE GVHKLFTSRE APEEILDVLS IKQSVLERYP ALPQQLLAVW QRAYEYTEQH PKQAFAIMAE REQVSVEEFE TMFNNEIHVF DKDGALQILR DWSSLTNKLM ETCEVLKEIN QHNSNCSRVH TMVNREMF
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