Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0400 |
Symbol | |
ID | 3967608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 496347 |
End bp | 497126 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919463 |
Product | bax protein, putative |
Protein accession | YP_525876 |
Protein GI | 90020049 |
COG category | [R] General function prediction only |
COG ID | [COG2992] Uncharacterized FlgJ-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.342974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG CTAAAACTAA GTTTATTGCA CTGCTTTTTA CCGCCTATAT TATTGCCACC TTTGGCCTAC TTATTTGGGC AATTCAGCAC TCCCCCAGCC GCGCCATTAA TACTTCTACT GCGTTTGGCC CAGCCCCAGA CTTTAGCGCC ATTACCGATA TTGCCGAACG CAAAGCGACG TTTTTTAATT ATTTCACCCC CATTATTGAA CACAAAAACA CGTTAATACT TGCCGACAGA GAACGACTGG CGGCGGTGCA AAACGACTGG CAAGAAGATG CAACACTCAG CAACACTCAC CAGTTTTATC TTTCGCGCTG GCTTAAGCGC TATAAAATTA AAGAAGAGTG GCCAATCGAA AAACAATTGG CAGAGCTAAA CAAGCGCATG CACATCATTC CGCCCGCACT GGTATTGGCG CAAGCAGCTA ACGAATCGGC TTGGGGTACA TCGCGCTTTG CGCAAGATGG CAATAATTAT TTTGGTCAGT GGTGTTTTAA AAAGGGCTGC GGCTTGGTGC CAAGTGGACG ACGCGCTAAC GCTAAACATG AAGTGCGAAA ATTTAAAAGC CCAGCGGGTT CGGTGGACGC CTACCTGCGC AACTTAAATA CTCACCGTGC TTACAAGCAA TTGAGAAACA TTCGCGCCCA GCTGCATCAA GCGAATCAGC CAATTACCGG CGTAGCATTG GCGGAAGGTT TAATAAAATA CTCGGAGCGC GGTGAAGAAT ACGTGCATGA GTTACAAGCG ATGATGCGCA GTAACGGCTT AGAGGAGTAA
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Protein sequence | MQNAKTKFIA LLFTAYIIAT FGLLIWAIQH SPSRAINTST AFGPAPDFSA ITDIAERKAT FFNYFTPIIE HKNTLILADR ERLAAVQNDW QEDATLSNTH QFYLSRWLKR YKIKEEWPIE KQLAELNKRM HIIPPALVLA QAANESAWGT SRFAQDGNNY FGQWCFKKGC GLVPSGRRAN AKHEVRKFKS PAGSVDAYLR NLNTHRAYKQ LRNIRAQLHQ ANQPITGVAL AEGLIKYSER GEEYVHELQA MMRSNGLEE
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