| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0386 |
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| Symbol | |
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| ID | 3967594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 475843 |
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| End bp | 477126 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919449 |
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| Product | 3-deoxy-D-manno-octulosonic-acid (KDO) transferase |
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| Protein accession | YP_525862 |
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| Protein GI | 90020035 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGAC TTTTTTACAC TTTATTATTT ACCCTCGCGC TGCCCATTAT TGTGGTGCGC
CTGTGGTTGC GCGGTAGCAA ACTACCCGCT TACCGCGCGC GTATCGGCGA ACGCTTTGGT
GTAATACCGC CACTAGAAAA GAAGCACAAA CAAACTATTT GGTTTCACAC TGTATCGGTG
GGCGAATTTA TTGCTGCCTC GCAACTTATC AACGCGCTGC TAGAAACCAA CCAATACGAC
ATAGTAATTA CCACTACCAC ACCCACCGGT AGCGAACAGG TAAGCAAAAA ATTCGGCACG
CGCGTGTACC ATGTTTACGC CCCCTACGAC ATACCGTTTT TAATTAATCG CTTTTTAAAT
AAAACCGCAC CCAGCTTAGC CGTGTTTATG GAAACAGAAC TGTGGCCCAA CACATTGCGC
CAATGCCACA AGCACGGCAT ACCCACACTG TTAGCCAACG GCAGGCTCTC GGCAAAATCC
GCTAAGGGTT ATGCAAAATT TAGCAGCCTA ACTAAGCCCA TGTTGCACAA CCTAAGTTTT
GCCGCCATCC AAAACTCGGC AGACGCAGAA CGCTTTTACC GCCTAGGGCT TGCACAAAAC
AACAGTGAAG TAACCGGCAG TATTAAATTT GATATAGCCG TAGATGCAAC CATCGCAGAG
CGCGCCGCGC AATTAAAAGG TGAATACAGC CTTGAAGGCA AACGCAAAAT TCTTATCGCC
GCCAGCACCC ACCGCGGTGA AGATGAAATA ATTCTTGACG CCTTTCACAA ATTATTGGAA
AGAGACAACT CCCTGCTACT GCTATTGGTA CCTCGCCACC CAGATAGATT CAACAATGTT
GCACAACTGT GCACAACACG CGGCTTTTAT ATTGTTACCC GCAGCAGCCA GCAAGCGCCA
AGCGCACAAA CACACATAGT GCTAGGCGAT ACCATGGGCG AGCTGATGCT TATGTACGGC
GCTGCAGATA TAGCCTTTGT GGGCGGCAGC TTTGTTGCGA ATGGCGGCCA CAACTATTTA
GAGCCTGCCG TGTGGGGGCT GCCTATTGTA TCTGGCCCCA GCCAATTTAA TTTTGCTACC
ATTGCCCAAG CACTTACCCA AGCGGCAAGC TTATATACGG TTCACAGCGC CGATGAATTG
GCCGATCAAG TTGACGGACT ATTTGCCAAT GCAGCCATAG CACAACAGGC AGGTTTAGCC
GGTAAGCGGT TTGTAAGCGA AAACCAAGGC GCCACGCAGA AACATCTCGA TATAATTCAA
CGGCTATTGG CTAACGCGCC TTAG
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| Protein sequence | MLRLFYTLLF TLALPIIVVR LWLRGSKLPA YRARIGERFG VIPPLEKKHK QTIWFHTVSV
GEFIAASQLI NALLETNQYD IVITTTTPTG SEQVSKKFGT RVYHVYAPYD IPFLINRFLN
KTAPSLAVFM ETELWPNTLR QCHKHGIPTL LANGRLSAKS AKGYAKFSSL TKPMLHNLSF
AAIQNSADAE RFYRLGLAQN NSEVTGSIKF DIAVDATIAE RAAQLKGEYS LEGKRKILIA
ASTHRGEDEI ILDAFHKLLE RDNSLLLLLV PRHPDRFNNV AQLCTTRGFY IVTRSSQQAP
SAQTHIVLGD TMGELMLMYG AADIAFVGGS FVANGGHNYL EPAVWGLPIV SGPSQFNFAT
IAQALTQAAS LYTVHSADEL ADQVDGLFAN AAIAQQAGLA GKRFVSENQG ATQKHLDIIQ
RLLANAP
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