Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0373 |
Symbol | |
ID | 3967620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 460400 |
End bp | 460990 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919436 |
Product | DNA repair protein RadA |
Protein accession | YP_525849 |
Protein GI | 90020022 |
COG category | [R] General function prediction only |
COG ID | [COG3150] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCG TTCTCTATTT GCACGGCTTT CTAAGCTCGC CACAATCCAG CAAAGCTAAG GTTACTTGGC GTTGGTTGGC GAAAAATCAT CCAGATGTCG ACTTCTGTTG CCCGCAGCTT TCCTCCTACC CTAGCCAGGC AATAGCGCAA ATTGAGGCAG AGCTAGATTC CCTTACGCAA CCCGTGTACG TTATTGGCAG TTCGCTGGGC GGCTTTTGGG CCACTAACCT TGTAGAGCGC GGGCTAGTCG CAAAAGCGGT ATTGGTTAAC CCAGCCGTAG ACCCGCACAC CCGTTTCGAC GAATTTAAAA ACGTGCCGCT GCAAAGCTAC TATTCCGATG AAACCTATTG TCTTACCGAA AAGGATTTGC AAGACTTGGT GGCGCTTAAC TATGTCGAAC CGCAGCAGCC CAACAAATAT ATGCTAATGG TGCAAACCGG CGACGAAACC CTCGACTACC GCATGGCTAC AAAAAAGTAT CGCCACTGCA AACAAATAGT TGAAGAAGGC GGCAGCCACA CTTTTGACGG GTATGAAAAT TGGCTGCCCC AAATAATCGA ATTTTTTACC CAACAATCAT CAGACCAATA A
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Protein sequence | MATVLYLHGF LSSPQSSKAK VTWRWLAKNH PDVDFCCPQL SSYPSQAIAQ IEAELDSLTQ PVYVIGSSLG GFWATNLVER GLVAKAVLVN PAVDPHTRFD EFKNVPLQSY YSDETYCLTE KDLQDLVALN YVEPQQPNKY MLMVQTGDET LDYRMATKKY RHCKQIVEEG GSHTFDGYEN WLPQIIEFFT QQSSDQ
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