Gene Sde_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0373 
Symbol 
ID3967620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp460400 
End bp460990 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID637919436 
ProductDNA repair protein RadA 
Protein accessionYP_525849 
Protein GI90020022 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG TTCTCTATTT GCACGGCTTT CTAAGCTCGC CACAATCCAG CAAAGCTAAG 
GTTACTTGGC GTTGGTTGGC GAAAAATCAT CCAGATGTCG ACTTCTGTTG CCCGCAGCTT
TCCTCCTACC CTAGCCAGGC AATAGCGCAA ATTGAGGCAG AGCTAGATTC CCTTACGCAA
CCCGTGTACG TTATTGGCAG TTCGCTGGGC GGCTTTTGGG CCACTAACCT TGTAGAGCGC
GGGCTAGTCG CAAAAGCGGT ATTGGTTAAC CCAGCCGTAG ACCCGCACAC CCGTTTCGAC
GAATTTAAAA ACGTGCCGCT GCAAAGCTAC TATTCCGATG AAACCTATTG TCTTACCGAA
AAGGATTTGC AAGACTTGGT GGCGCTTAAC TATGTCGAAC CGCAGCAGCC CAACAAATAT
ATGCTAATGG TGCAAACCGG CGACGAAACC CTCGACTACC GCATGGCTAC AAAAAAGTAT
CGCCACTGCA AACAAATAGT TGAAGAAGGC GGCAGCCACA CTTTTGACGG GTATGAAAAT
TGGCTGCCCC AAATAATCGA ATTTTTTACC CAACAATCAT CAGACCAATA A
 
Protein sequence
MATVLYLHGF LSSPQSSKAK VTWRWLAKNH PDVDFCCPQL SSYPSQAIAQ IEAELDSLTQ 
PVYVIGSSLG GFWATNLVER GLVAKAVLVN PAVDPHTRFD EFKNVPLQSY YSDETYCLTE
KDLQDLVALN YVEPQQPNKY MLMVQTGDET LDYRMATKKY RHCKQIVEEG GSHTFDGYEN
WLPQIIEFFT QQSSDQ