Gene Sde_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0348 
Symbol 
ID3964814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp431820 
End bp434090 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content53% 
IMG OID637919411 
Productphosphoenolpyruvate-protein phosphotransferase PtsP 
Protein accessionYP_525824 
Protein GI90019997 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.130552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATG ATTTGCGTAG TATCGTTCAA GAGGTATATG CCGCTACAGA TCTAAGCTCG 
GTATTAGAGA TTATTGTTCG CCGAGTTAAA TCAGCCATGA ACACCGAAGT GTGTTCGGTA
TACCTACGCA ACGAAACTGG CGCTTACACT TTAATGGCTA CCGATGGCTT AAATCGCGAA
GCGGTAGGCC GCGTTACACT GGCTAAAAAC GAAGGTTTGG TGGGGTTGGT TGCCGCGCGC
GAAGAGCCTA TAAACCTAGA CGACGCCGAA TCTCACCCCA AATATCAATA CTTTGCCGAA
ACCGGCGAAG AGCGCTTTTC TGCATTTTTA GGCACCCCAA TTATTCACCA GCGTCAGGTT
ATGGGGGTGC TGGTAGTGCA GCAGGCGGCT AAGCGTCGCT TTGATGAAGG CGAAGAAGCA
TTTCTTATTA CCATGTCTGC CCAGCTTGCC GGTGTGATTG CACATGCCGA GGCTACAGGT
ACCTTGCGGG CAATGGGGTC TAAATCTGCG GTGCGTTTTA ACGGCGTGCC GGGGGCCTCG
GGTGTGGCTA TTGGCGAATG TGTGGTGGTA TCGCCGGTTG CCGACCTAAA TGCCGTGCCT
TATGCCACCT GTGACAACAT AGAAGAAGAG CTGGCCTTTT TTAGCCGCAG TTTGGCGGCG
GTGCGCGAAG ACGTAAAGCG CTTGGGGCAG TCCTTAGAAA ACCTGTTAAA CAAAGAAGAG
CGGGTATTGT TTGATGCTTA CCTAGGTATG CTCGACGATA CATCGCTGGC CCGCGAGGTA
ACCGAAAAAA TTAGTATGGG TTTGGCTGCG CCTTACGCGT GGAGCGAGGT GATTTTAGAT
CACGTTAAAA CCTTCTCTGC CATGCCCGAT GCCTACCTGC GCGAGCGTGC ATCCGATGTG
CGAGACTTGG GCAGTCGCGT ATTAGCCTAC CTGCAAGAAA CCACGCAAAA AGAATTGGTA
TACCCCGAAA AAACTATATT GGTGGGTGAA GATCTCACGC CATCAATGCT TGCCGAAGTG
CCGGTGGGGC AGCTGGCGGG TTTAGTGTCT GTGCGCGGTT CGAGCAACTC CCACATTGCC
ATTTTGGCGC GGTCGATGGG TATTCCCACC ATTATGGGGG CGGTCGATCT GCCGTTTACC
AAGCTTAATG GCAGAGAAAT GGTAGTCGAT GGCTACCGCG GGTCGGTCTA TATCGACCCA
GGCGAAGCGT TGTTGCAAAG CTATCAAGCC ATATTGGAAG AAGATTTACA GCTGGTTGCT
GGCCTGCAGT CTATAAAAAA CCTGCCCTGC GAAACCTCAG ACCACCACCG CGTTGCCCTT
TGGGTAAACA CTGGTCTATT GGCCGATACC ATGCTTTCTA TCGAGCGCGG CGCCGAAGGG
GTGGGGTTGT ATCGCACCGA AGTGCCTTTT ATGTTGCGCG ATCGCTTTCC CAGTGAGGAA
GAGCAGCGCT TGGTGTACCG CGAGCAGCTA GAAGCGTTTG CGCCGCACCC AGTAACCATG
CGTACACTCG ATGTGGGCGG TGATAAATCT TTACCCTACT TCCCTATCGA AGAGGAAAAC
CCTTTCTTGG GGTGGCGCGG TATTCGCGTA ACCCTCGATC ACCCAGAGAT TTTTCTAGGC
CAAGTGCGCG CCATGCTTAA AGCGAGTGTG GGGTTAGATA ACCTGCGCAT TATGCTGCCA
ATGATTACCA ATATTGCCGA AGTCGAAATA GCCCAAATGC TTATTCATCG CGCCTACGAT
GAATTACTAG AAGAGGGCTA CGATGTGCAA ATGCCGCCCT TGGGGGTGAT GATCGAAGTG
CCTGCTGCGG TGTATCAAGC AAAAGAGTTG GCGGCGCGCG TAGATTTTAT TTCTGTGGGC
AGTAACGATT TGACGCAATA CTTGCTGGCC GTAGACCGCA ACAACCCTCG CGTCGCCGAT
TTGTATCATT CACTGCACCC GGCGGTGCTG CGCGCTTTGC GCAAAATTGT AAAAGATGCC
CACAGCCAAG GTGTGCCGGT AAGTATTTGT GGTGAGTTGG CCGGCGAGCC TGCCGCAGCC
CTTTTGTTGG TGGCAATGGG GTATGATGTG CTCTCGATGA ACGCCACCAA CCTGCTTAAG
GTTAAATCGG TTGTGCGGGC TGTAACGCTC GAGCAAGCGG AAACCCTATT GGCAGAGGTG
ATGTCGCTGC CTGATGCCGA GTCGATTAAC CGCTGCCTAG AGGCTGCATT CCGCCATGCG
GGGCTCAATC GCATGTTGCG CCCAGACCTT GGCGATGACG CCAACATCTA G
 
Protein sequence
MLNDLRSIVQ EVYAATDLSS VLEIIVRRVK SAMNTEVCSV YLRNETGAYT LMATDGLNRE 
AVGRVTLAKN EGLVGLVAAR EEPINLDDAE SHPKYQYFAE TGEERFSAFL GTPIIHQRQV
MGVLVVQQAA KRRFDEGEEA FLITMSAQLA GVIAHAEATG TLRAMGSKSA VRFNGVPGAS
GVAIGECVVV SPVADLNAVP YATCDNIEEE LAFFSRSLAA VREDVKRLGQ SLENLLNKEE
RVLFDAYLGM LDDTSLAREV TEKISMGLAA PYAWSEVILD HVKTFSAMPD AYLRERASDV
RDLGSRVLAY LQETTQKELV YPEKTILVGE DLTPSMLAEV PVGQLAGLVS VRGSSNSHIA
ILARSMGIPT IMGAVDLPFT KLNGREMVVD GYRGSVYIDP GEALLQSYQA ILEEDLQLVA
GLQSIKNLPC ETSDHHRVAL WVNTGLLADT MLSIERGAEG VGLYRTEVPF MLRDRFPSEE
EQRLVYREQL EAFAPHPVTM RTLDVGGDKS LPYFPIEEEN PFLGWRGIRV TLDHPEIFLG
QVRAMLKASV GLDNLRIMLP MITNIAEVEI AQMLIHRAYD ELLEEGYDVQ MPPLGVMIEV
PAAVYQAKEL AARVDFISVG SNDLTQYLLA VDRNNPRVAD LYHSLHPAVL RALRKIVKDA
HSQGVPVSIC GELAGEPAAA LLLVAMGYDV LSMNATNLLK VKSVVRAVTL EQAETLLAEV
MSLPDAESIN RCLEAAFRHA GLNRMLRPDL GDDANI