Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0348 |
Symbol | |
ID | 3964814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 431820 |
End bp | 434090 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637919411 |
Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
Protein accession | YP_525824 |
Protein GI | 90019997 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.130552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAATG ATTTGCGTAG TATCGTTCAA GAGGTATATG CCGCTACAGA TCTAAGCTCG GTATTAGAGA TTATTGTTCG CCGAGTTAAA TCAGCCATGA ACACCGAAGT GTGTTCGGTA TACCTACGCA ACGAAACTGG CGCTTACACT TTAATGGCTA CCGATGGCTT AAATCGCGAA GCGGTAGGCC GCGTTACACT GGCTAAAAAC GAAGGTTTGG TGGGGTTGGT TGCCGCGCGC GAAGAGCCTA TAAACCTAGA CGACGCCGAA TCTCACCCCA AATATCAATA CTTTGCCGAA ACCGGCGAAG AGCGCTTTTC TGCATTTTTA GGCACCCCAA TTATTCACCA GCGTCAGGTT ATGGGGGTGC TGGTAGTGCA GCAGGCGGCT AAGCGTCGCT TTGATGAAGG CGAAGAAGCA TTTCTTATTA CCATGTCTGC CCAGCTTGCC GGTGTGATTG CACATGCCGA GGCTACAGGT ACCTTGCGGG CAATGGGGTC TAAATCTGCG GTGCGTTTTA ACGGCGTGCC GGGGGCCTCG GGTGTGGCTA TTGGCGAATG TGTGGTGGTA TCGCCGGTTG CCGACCTAAA TGCCGTGCCT TATGCCACCT GTGACAACAT AGAAGAAGAG CTGGCCTTTT TTAGCCGCAG TTTGGCGGCG GTGCGCGAAG ACGTAAAGCG CTTGGGGCAG TCCTTAGAAA ACCTGTTAAA CAAAGAAGAG CGGGTATTGT TTGATGCTTA CCTAGGTATG CTCGACGATA CATCGCTGGC CCGCGAGGTA ACCGAAAAAA TTAGTATGGG TTTGGCTGCG CCTTACGCGT GGAGCGAGGT GATTTTAGAT CACGTTAAAA CCTTCTCTGC CATGCCCGAT GCCTACCTGC GCGAGCGTGC ATCCGATGTG CGAGACTTGG GCAGTCGCGT ATTAGCCTAC CTGCAAGAAA CCACGCAAAA AGAATTGGTA TACCCCGAAA AAACTATATT GGTGGGTGAA GATCTCACGC CATCAATGCT TGCCGAAGTG CCGGTGGGGC AGCTGGCGGG TTTAGTGTCT GTGCGCGGTT CGAGCAACTC CCACATTGCC ATTTTGGCGC GGTCGATGGG TATTCCCACC ATTATGGGGG CGGTCGATCT GCCGTTTACC AAGCTTAATG GCAGAGAAAT GGTAGTCGAT GGCTACCGCG GGTCGGTCTA TATCGACCCA GGCGAAGCGT TGTTGCAAAG CTATCAAGCC ATATTGGAAG AAGATTTACA GCTGGTTGCT GGCCTGCAGT CTATAAAAAA CCTGCCCTGC GAAACCTCAG ACCACCACCG CGTTGCCCTT TGGGTAAACA CTGGTCTATT GGCCGATACC ATGCTTTCTA TCGAGCGCGG CGCCGAAGGG GTGGGGTTGT ATCGCACCGA AGTGCCTTTT ATGTTGCGCG ATCGCTTTCC CAGTGAGGAA GAGCAGCGCT TGGTGTACCG CGAGCAGCTA GAAGCGTTTG CGCCGCACCC AGTAACCATG CGTACACTCG ATGTGGGCGG TGATAAATCT TTACCCTACT TCCCTATCGA AGAGGAAAAC CCTTTCTTGG GGTGGCGCGG TATTCGCGTA ACCCTCGATC ACCCAGAGAT TTTTCTAGGC CAAGTGCGCG CCATGCTTAA AGCGAGTGTG GGGTTAGATA ACCTGCGCAT TATGCTGCCA ATGATTACCA ATATTGCCGA AGTCGAAATA GCCCAAATGC TTATTCATCG CGCCTACGAT GAATTACTAG AAGAGGGCTA CGATGTGCAA ATGCCGCCCT TGGGGGTGAT GATCGAAGTG CCTGCTGCGG TGTATCAAGC AAAAGAGTTG GCGGCGCGCG TAGATTTTAT TTCTGTGGGC AGTAACGATT TGACGCAATA CTTGCTGGCC GTAGACCGCA ACAACCCTCG CGTCGCCGAT TTGTATCATT CACTGCACCC GGCGGTGCTG CGCGCTTTGC GCAAAATTGT AAAAGATGCC CACAGCCAAG GTGTGCCGGT AAGTATTTGT GGTGAGTTGG CCGGCGAGCC TGCCGCAGCC CTTTTGTTGG TGGCAATGGG GTATGATGTG CTCTCGATGA ACGCCACCAA CCTGCTTAAG GTTAAATCGG TTGTGCGGGC TGTAACGCTC GAGCAAGCGG AAACCCTATT GGCAGAGGTG ATGTCGCTGC CTGATGCCGA GTCGATTAAC CGCTGCCTAG AGGCTGCATT CCGCCATGCG GGGCTCAATC GCATGTTGCG CCCAGACCTT GGCGATGACG CCAACATCTA G
|
Protein sequence | MLNDLRSIVQ EVYAATDLSS VLEIIVRRVK SAMNTEVCSV YLRNETGAYT LMATDGLNRE AVGRVTLAKN EGLVGLVAAR EEPINLDDAE SHPKYQYFAE TGEERFSAFL GTPIIHQRQV MGVLVVQQAA KRRFDEGEEA FLITMSAQLA GVIAHAEATG TLRAMGSKSA VRFNGVPGAS GVAIGECVVV SPVADLNAVP YATCDNIEEE LAFFSRSLAA VREDVKRLGQ SLENLLNKEE RVLFDAYLGM LDDTSLAREV TEKISMGLAA PYAWSEVILD HVKTFSAMPD AYLRERASDV RDLGSRVLAY LQETTQKELV YPEKTILVGE DLTPSMLAEV PVGQLAGLVS VRGSSNSHIA ILARSMGIPT IMGAVDLPFT KLNGREMVVD GYRGSVYIDP GEALLQSYQA ILEEDLQLVA GLQSIKNLPC ETSDHHRVAL WVNTGLLADT MLSIERGAEG VGLYRTEVPF MLRDRFPSEE EQRLVYREQL EAFAPHPVTM RTLDVGGDKS LPYFPIEEEN PFLGWRGIRV TLDHPEIFLG QVRAMLKASV GLDNLRIMLP MITNIAEVEI AQMLIHRAYD ELLEEGYDVQ MPPLGVMIEV PAAVYQAKEL AARVDFISVG SNDLTQYLLA VDRNNPRVAD LYHSLHPAVL RALRKIVKDA HSQGVPVSIC GELAGEPAAA LLLVAMGYDV LSMNATNLLK VKSVVRAVTL EQAETLLAEV MSLPDAESIN RCLEAAFRHA GLNRMLRPDL GDDANI
|
| |