| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0329 |
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| Symbol | |
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| ID | 3966509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 410621 |
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| End bp | 411301 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919391 |
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| Product | putative ABC transport system, ATP-binding protein |
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| Protein accession | YP_525805 |
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| Protein GI | 90019978 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.292409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAT TACACAATAT TTGCCGCACA TATCGCACCA ACGAAGTAGA AACCTTGGCA
CTGAATAATG TCAATGTAGA AATAGCTGCG GGCGATTTCG TGGCTATTAT GGGGCCGTCT
GGTTGTGGAA AATCAACATT GTTAAACACC ATTGGCATGT TAGATTCACC CACCAGTGGC
GATTACATAT TTAATGGCGA AAATATTGCG GGCTATAGCG AATCGCAGCT GGCAAATATT
AGAAAGCGCA ATATAGGCTT TATATTTCAA AACTTTAATT TAATAGATGA ATTAACAGTA
GAAGAAAATA TAGAGCTGGC ACTGCTCTAT CACAAAATTC CAGTTGCAGA GCGAAAACAA
CGTGTAGCCA AAGTAATGGA TAAAGTAGGT ATAGCGCATA GAGCCAAACA TATGCCCAGC
CAACTTTCCG GTGGTCAGCA GCAGCGGGTT GCCGTTGCGC GCGCGGTTGT GGGCAATCAG
GATGTGATAT TAGCAGATGA ACCAACCGGT AACTTAGATA GCGCCCACGG GCAAGAAGTA
ATGGAAATGC TGTTAGCACT TAACAAAGAG GGCACTACCA TCATTATGGT TACCCACAGC
CCAGCCCATG CCGACTATGC AAAGCGTACC ATCAATCTAT TTGATGGAAA AATAATAACC
GAAAATATGC GCGCAGCCTA A
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| Protein sequence | MLKLHNICRT YRTNEVETLA LNNVNVEIAA GDFVAIMGPS GCGKSTLLNT IGMLDSPTSG
DYIFNGENIA GYSESQLANI RKRNIGFIFQ NFNLIDELTV EENIELALLY HKIPVAERKQ
RVAKVMDKVG IAHRAKHMPS QLSGGQQQRV AVARAVVGNQ DVILADEPTG NLDSAHGQEV
MEMLLALNKE GTTIIMVTHS PAHADYAKRT INLFDGKIIT ENMRAA
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