| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0323 |
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| Symbol | |
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| ID | 3968591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 401230 |
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| End bp | 403242 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919385 |
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| Product | TonB-like |
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| Protein accession | YP_525799 |
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| Protein GI | 90019972 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000416946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.597274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATAA TAACTATGAA AGCCGGTTTA CTTCTACGCA TCCTATTAAC TGTACTCGCG
CTCAATATGC TTGCCGCATG TGGCGGTAGT TCTAGCAATA CCAAAGAACC CGTTACCCAG
CCGGAACCAG AGCCAGAGCA GCAGCCAGAA CCAGAACCAG AGCCAGAGCC AGAGCCAGAG
CCAGAACCAG AGCCAGAACC AGAGCCAGAA CCAGAGCCAG AGCCTGAAAT GGAACCGCAG
CCAGAGCCAC AAGCGCCGCC TGCAGGTGGT GTATCTATCA TTGATACCAA CCCCAACAAT
GCATCGTTTT GGGCAGGCTC AAACAATGGT GATGTGGGCA GTAGGGCTGT TATAGATGTC
GATCACCCCG AATTTAGCCA AGCGACGCGC ATAACCGTAA GCAACCCCGC TAGCGACTAT
TGGAATGGTC AGCTCTCCTT CCCGCTTAAT GCGAGTGTGG CGGCGGGGGA TGTAGTATTA
GTGCGTTTGT ACATGCGCTC GGTGGAGAAT ACTTACGAAT CGGGTGCTAG TTTTACTACC
GTATTTATTG AAGACAACAT CGACTTTACT AAATTTTTAA ACCGCGAAAT AACCGCCGCG
CAAGATTGGG TAGAGTATTA CCTACCCGCA GAAATTACCG ATAACCATGC AACCGGTGAA
GTGGGCTTGC GCATTGGCTT TGGCGCTGGC CCTAGGGCGC AGGTGTTTGA TATTGGCGGT
GTAGAGCTAT TGCATTACAC CAATACTGAT ATAAGCGCTA TGCCTAGTAC ACGCCCAAGT
TACGAAGGCC GCGAGCCAGA TGCCGCATGG CGTACAGCGG CGGCAGAGCG AATTGAGCAG
CACCGCAAAG GCGACTTTGA GCTAACAGTA GTGGACGATG GCAACCCTAT CGCCAATGCC
ACCATAGATG TAGATTTTCA AAAACACGCC TATCATTTTG GCTCGGTAAC TGTTGGCCAT
CTATTGATGG GCACCAGTGA AGATAGCGCC ATTTACCGCG AAAAAGTGCT CGAGCTATTT
AACCAAAGTG GCCCAGAAAA CGATTTAAAG TGGGGCCCAT GGGAAGGCGA GTGGGGCAAC
AATTTTAACC AAACTCAAAC CCTAAACGGC TTGCAGTGGC TGCGCGATAA CGGCCTGTAC
ACACGTGGCC ATGTAATGGT TTGGCCTTCT AAGCGCAACT TGCCAAACTT AATGCAGCAA
TATTTACCAG AAGGCGACCC CGCCAGCGCC AACCCAGAAG CAAAACAAGT GGTGCTGGAT
CACATCGATG ATATAGCAAC CGCAACAGCT AATTATTTAG ATGAGTGGGA TGTACTAAAC
GAGCCTTACG ACAACCACTA TTTAATGGAT GCCTTTGGCG ATAGTGTAAT GGTGGATTGG
TTTAATCGCG CGCGTACTAA CCTGCCTGCG CACGGTTTGT ACATAAACGA TTACAGTATT
TTATCTGCGG GCGGGCGCAA TTTTGCTCAC CAAGAACACT ACACCAACAC GATTCAATAT
TTGGTCGATA ACAACGCACC CATCACCGGT ATAGGTTTGC AAAGTCACTT TGGCGACTCG
CCTACAGCCA TTACGCGTAT TTACGAAATT ATTGATCAAT ACAGTACCGC GTTTCCGCAG
TTAGATATTC GCGCAACGGA ATTTGACGTA AGTACAACAG ATGAAGACCT GCAGGCAGAT
TTTACCCGCG ACTTCTTAAC GATATTCTTT AGCCACCCTA AAACAGTGGG TGTGCAGTTG
TGGGGTTTTT GGGCAAATGC ACATTGGTAC CCTAATGCAG CGCTTTATGA TGCCGATTGG
CGAGAAAAGC CCAATGCACT AGCTTGGAAA GAGCAAATTT TTAACGAGTG GTGGAACGAC
TTTGACGGCA CGACCAACGC ACAGGGTAAA TTTGATGAAC GCGGTTTTTA CGGCGATTAC
CAAGTAACTG TAACCGTAGG TGAAGAGCAG CAAATTTTTA CCTTTAGCCT AGTTAAAGGC
GGCGAACAAA ACTTTAGTTT TGAGTGGCAA TAG
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| Protein sequence | MVIITMKAGL LLRILLTVLA LNMLAACGGS SSNTKEPVTQ PEPEPEQQPE PEPEPEPEPE
PEPEPEPEPE PEPEPEMEPQ PEPQAPPAGG VSIIDTNPNN ASFWAGSNNG DVGSRAVIDV
DHPEFSQATR ITVSNPASDY WNGQLSFPLN ASVAAGDVVL VRLYMRSVEN TYESGASFTT
VFIEDNIDFT KFLNREITAA QDWVEYYLPA EITDNHATGE VGLRIGFGAG PRAQVFDIGG
VELLHYTNTD ISAMPSTRPS YEGREPDAAW RTAAAERIEQ HRKGDFELTV VDDGNPIANA
TIDVDFQKHA YHFGSVTVGH LLMGTSEDSA IYREKVLELF NQSGPENDLK WGPWEGEWGN
NFNQTQTLNG LQWLRDNGLY TRGHVMVWPS KRNLPNLMQQ YLPEGDPASA NPEAKQVVLD
HIDDIATATA NYLDEWDVLN EPYDNHYLMD AFGDSVMVDW FNRARTNLPA HGLYINDYSI
LSAGGRNFAH QEHYTNTIQY LVDNNAPITG IGLQSHFGDS PTAITRIYEI IDQYSTAFPQ
LDIRATEFDV STTDEDLQAD FTRDFLTIFF SHPKTVGVQL WGFWANAHWY PNAALYDADW
REKPNALAWK EQIFNEWWND FDGTTNAQGK FDERGFYGDY QVTVTVGEEQ QIFTFSLVKG
GEQNFSFEWQ
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