| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0320 |
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| Symbol | |
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| ID | 3968588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 397816 |
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| End bp | 398502 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919382 |
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| Product | putative transcription regulator protein |
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| Protein accession | YP_525796 |
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| Protein GI | 90019969 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.330928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.565016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACTA GCACAGTGTA CAATATTGTT ATTCCCATAT ACGAAGGTGT AGATTTGCTG
GATGTAACCG TGCCCTACGA AGTATTTAAC TGGGTGCAAA CACGCGATAA AACGCCAGCA
ACTAAGGTGT ACCTAGTGGG GCAGAGTGGT GCTGCTGTTA AAACACGCGA TGGTTTTACT
ATTATCCCAG AGTGCTCGTT CGAGCAGTTC GAAAATGCAG GTATTACTTG TAATTTGATC
TGGGTGCCTG GTGGCGACCC TGCAAATCTT GAAGCGCAAA TGAAAAACGC CTGCTATACC
AATTTTATAA TCGGCTTAAG TAAAAATGCC GACTATGTAA CATCTGTATG CGAAGGCGCA
TTACTGCTTG CCAATGCTGG CTTGCTTACG CATTACAAAG CCACAACCCA CTGGGCTTTT
ATTCCCTGCC TTAAATCTTA CCCGGGTATA TATGTTCAAG AAAATGTGCG CTTTGTTGTG
GATGGTAATA GGGTAACGGG TGGTGGGGTT TCGTCTGGCT TGGATGAATG CTTCGAACTA
ATTATTCTAA TATTTGGTCA AGAGGCTGCT GAGGCAGTAC AAAAAACTAT TCAATACTAC
CCAGACCCGC CGCTTAAAGG TAAGGTGCCA GAAGCCAGTG CTTGCCCTAG CGAAGGTTTA
TTGCATGGTG GTTTGTGTTC TGGTTAA
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| Protein sequence | METSTVYNIV IPIYEGVDLL DVTVPYEVFN WVQTRDKTPA TKVYLVGQSG AAVKTRDGFT
IIPECSFEQF ENAGITCNLI WVPGGDPANL EAQMKNACYT NFIIGLSKNA DYVTSVCEGA
LLLANAGLLT HYKATTHWAF IPCLKSYPGI YVQENVRFVV DGNRVTGGGV SSGLDECFEL
IILIFGQEAA EAVQKTIQYY PDPPLKGKVP EASACPSEGL LHGGLCSG
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