| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0308 |
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| Symbol | |
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| ID | 3968576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 380837 |
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| End bp | 381550 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919370 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_525784 |
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| Protein GI | 90019957 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0332817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CACTAATTGA ACTAAAAGCC GTAAAAAAGA TTTTCTATAC CGAAGAAGTT
GAATCTCATG CGTTAAGCAA TATTTCGCTT AGTATAAACA GGGGCGAGTA TATTTCTATA
TCTGGGCCAT CTGGCTGCGG TAAATCTACC CTACTTTCTA TTTTAGGTTT GTTAGATACC
GCCAGTGAAG GCGAATACAG CTTAGCAGGC AAGCAAGTTG CCAATCTATC TAAAGCCGAG
CGCGCAAAAA TACGCAACAA AGAAATTGGC TTTGTTTTTC AATCTTTTAA TTTAATTAGC
GATTTAAACG TAGAAGAAAA CGTAGAGCTA CCGCTTACCT ATCGAACAGA TTTAACTAAA
GCACAGCGCA AAAGCATGGT GAAAGAAGCG CTGCAAAAAG TGAATATGAA TCACCGCTCT
AAACATTTCC CATCGCAGCT TTCTGGCGGC CAGCAACAAC GGGTGGCTGT AGCGCGCGCC
ATAGCGGGCA AGCCATCAAT TATTTTAGCC GATGAACCAA CAGGCAACCT AGACACAACC
AACGCGACCG CAGTAATGCA ACTACTAGAC ACCCTACACA AAGAGGGCGC CACTATTTGT
ATGGTTACCC ACGACCCCCG CGCCGCCATG CAAACAGAGC GTGAAATTAA AATACTCGAT
GGCAAAATTA CAGCCGATTC GCAGCTTAAC TTACCAGAAG CTATGTCAGC TTAG
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| Protein sequence | MNTPLIELKA VKKIFYTEEV ESHALSNISL SINRGEYISI SGPSGCGKST LLSILGLLDT
ASEGEYSLAG KQVANLSKAE RAKIRNKEIG FVFQSFNLIS DLNVEENVEL PLTYRTDLTK
AQRKSMVKEA LQKVNMNHRS KHFPSQLSGG QQQRVAVARA IAGKPSIILA DEPTGNLDTT
NATAVMQLLD TLHKEGATIC MVTHDPRAAM QTEREIKILD GKITADSQLN LPEAMSA
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