| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0306 |
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| Symbol | |
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| ID | 3965445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 376962 |
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| End bp | 378335 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919368 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_525782 |
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| Protein GI | 90019955 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0689092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGT CTATATTAAT AGCCGACGAC GATGAGGGAA TAATCTCTGC ACTTAGCCTG
CTATTAAAGT CAGAAGGCTT CACTGTAGAC ACTGCCTCGT CGCCACAACA GGTATTGGAC
AAACTCTTAC ATTGCGATTA CCACCTAGTG CTAATGGATT TAAACTACTC ATTTGATACC
ACCTCCGGTG AAGAAGGCCT GCATCTACTT ACTCGCATAC GCAACCAAGA AGAACTTTTA
CCCGTAGTGG TAATGACCGG TTGGGCAACA ATTGAGCTGG CAGTAAATAC CATAAAAAGC
GGCGCCAACG ATTTTATTCA AAAACCCTGG GATAACAATC AGCTACTCGC CACCATTCAC
AACCAGCTAA AACTTTTTAA CGCGCAAAAG CAAACGCAAA AGCTTAGCCA ACACAACCAA
CTGCTACAAA ACGAGCGGCG CATAAGCCTA CCCATTACCG CACACTCTGC CATCATGAAA
AGCCTATTGG CTAAATTACA GCAGGTGGCA AAAAGCGATG TAAATATTTT ACTTACCGGC
GAAAACGGTA CGGGCAAAAG TATGCTCGCC CGCTACGTGC ACGACTACTC TAATCGCGCT
AGCGCACCTT TTATAGCCGT TAATATGGGC GCAATTACTG AAACGCTTTT TGAAAGTGAA
ATGTTTGGCC ATTTAAAAGG CGCATTTACC GATGCCAAAC AAACTCGCAT TGGTCGTTTC
GAGCTTGCAG AAAGCGGCAC CTTATTTTTG GATGAAATAG CCAACACGCC ACTATCGCAG
CAGGCTAAAT TATTGCGAGT ATTAGAAGAA CGCCGCTTTG AAAAAGTAGG CGCAACTAAA
ACACAGGTTG CCGATATACG CTTAATAACT GCAACCAATA GCCAGCCCTC GCAACTGGTG
GCCGATGGGC TATTTAGGCA AGACTTGCTT TACAGAATTA ATACTGTAGA GCTTGTTGTT
CCGCCTCTGC GCGAGCGCCT AGAAGATATT ATCCCACTTG CGCAACACTA TTTAATGGCA
GTGGCCCAAA AATATAACCA GCCACAGCAC ACCCTAAGCG CCGCTGCGCA AACCGCATTG
TTACAGTACC CATGGCCTGG TAATGTACGC GAGCTTGGCC ACGTTATAGA GCGCGCCCAC
ATTTTAAGCG AAGGCCAAAT ACTGCAACCA AGTAATTTAG GCTTAGACAG CCAACCCAAT
AACTCCGCAG CCAGTGTTAA CAATAACGCA ACCGACTTGC GCACACTCGA AGCGATAGAG
CTAGATGCAC TAGAACAACG GTTTGAATAT TTTAATGGCG ATGCAATTCA AGCCGCTCAA
TCCCTTGGTT TAAGCCGCAG TACGTTTTAC CGCCGCTTAA GTAAAGCCAA ATAG
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| Protein sequence | MTASILIADD DEGIISALSL LLKSEGFTVD TASSPQQVLD KLLHCDYHLV LMDLNYSFDT
TSGEEGLHLL TRIRNQEELL PVVVMTGWAT IELAVNTIKS GANDFIQKPW DNNQLLATIH
NQLKLFNAQK QTQKLSQHNQ LLQNERRISL PITAHSAIMK SLLAKLQQVA KSDVNILLTG
ENGTGKSMLA RYVHDYSNRA SAPFIAVNMG AITETLFESE MFGHLKGAFT DAKQTRIGRF
ELAESGTLFL DEIANTPLSQ QAKLLRVLEE RRFEKVGATK TQVADIRLIT ATNSQPSQLV
ADGLFRQDLL YRINTVELVV PPLRERLEDI IPLAQHYLMA VAQKYNQPQH TLSAAAQTAL
LQYPWPGNVR ELGHVIERAH ILSEGQILQP SNLGLDSQPN NSAASVNNNA TDLRTLEAIE
LDALEQRFEY FNGDAIQAAQ SLGLSRSTFY RRLSKAK
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