Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0234 |
Symbol | |
ID | 3968076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 294612 |
End bp | 294950 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919294 |
Product | nitrogen regulatory protein P-II |
Protein accession | YP_525710 |
Protein GI | 90019883 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0347] Nitrogen regulatory protein PII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000834653 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA TTACAGCTGT AATTAAGCCG TTCAAACTAG ACGACGTGCG CAACGCGCTG TCTGAAATTG GCGTGCAAGG CATGACCGTA ACCGAAGTTA AGGGTTTTGG TCGTCAGAAG GGTCACACAG AGCTTTATAG AGGGGCCGAG TACGTTATCG ACTTTTTGCC TAAGGTAAAA TTAGAGCTAG TATTGGGTGA TGAGCTTATT GATCAAGCCG TAGAAGCCAT TTCTAAAGCG GCGCAAACCG GCAAAATTGG CGATGGCAAA ATCTTTATTA CGCCGTGCGA AGAGGTGATT CGCATTCGCA CCGGCGAAAC TGGCCCAGAG GCGGTTTAA
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Protein sequence | MKLITAVIKP FKLDDVRNAL SEIGVQGMTV TEVKGFGRQK GHTELYRGAE YVIDFLPKVK LELVLGDELI DQAVEAISKA AQTGKIGDGK IFITPCEEVI RIRTGETGPE AV
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