Gene Sde_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0234 
Symbol 
ID3968076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp294612 
End bp294950 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content48% 
IMG OID637919294 
Productnitrogen regulatory protein P-II 
Protein accessionYP_525710 
Protein GI90019883 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000834653 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA TTACAGCTGT AATTAAGCCG TTCAAACTAG ACGACGTGCG CAACGCGCTG 
TCTGAAATTG GCGTGCAAGG CATGACCGTA ACCGAAGTTA AGGGTTTTGG TCGTCAGAAG
GGTCACACAG AGCTTTATAG AGGGGCCGAG TACGTTATCG ACTTTTTGCC TAAGGTAAAA
TTAGAGCTAG TATTGGGTGA TGAGCTTATT GATCAAGCCG TAGAAGCCAT TTCTAAAGCG
GCGCAAACCG GCAAAATTGG CGATGGCAAA ATCTTTATTA CGCCGTGCGA AGAGGTGATT
CGCATTCGCA CCGGCGAAAC TGGCCCAGAG GCGGTTTAA
 
Protein sequence
MKLITAVIKP FKLDDVRNAL SEIGVQGMTV TEVKGFGRQK GHTELYRGAE YVIDFLPKVK 
LELVLGDELI DQAVEAISKA AQTGKIGDGK IFITPCEEVI RIRTGETGPE AV