Gene Sde_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0232 
Symbol 
ID3967083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp292701 
End bp293039 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content43% 
IMG OID637919292 
Productnitrogen regulatory protein P-II 
Protein accessionYP_525708 
Protein GI90019881 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0312248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.530475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA TTACTGCCGT AATTAAGCCT TTTAAATTGG ATGCAGTACG CGAAGCATTA 
TCAGAAATTG GTGTGCAAGG TATTACAGTA ACTGAAGTAA AAGGTTTCGG CCGTCAAAAA
GGTCATACAG AGCTATACCG TGGTGCAGAG TACGTAGTGG ACTTTCTGCC AAAAACTAAA
TTGGAAGTAG CGGTAGCAGA TAATCAGGTG GATTCTGTTG TAGAAACCAT CAGCAAAGCA
GCGCACAGCG GCAAGATTGG AGACGGAAAA ATATTCGTTT CAGCTCTTGA ACAAGTTATC
CGCATTCGCA CCGGCGAGTC CGGCGAAGAC GCACTTTAA
 
Protein sequence
MKLITAVIKP FKLDAVREAL SEIGVQGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKTK 
LEVAVADNQV DSVVETISKA AHSGKIGDGK IFVSALEQVI RIRTGESGED AL