| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0187 |
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| Symbol | |
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| ID | 3967972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 235935 |
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| End bp | 237770 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919247 |
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| Product | urease, beta subunit |
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| Protein accession | YP_525663 |
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| Protein GI | 90019836 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACGG TCCTAGGTGA GAATTTGAAC GATAAAACGG TCAAAAAGCT TCGCATTGAT
CGGTTACGTC GCTTGACTGA AGCTGAATCT GGTGAGGCGC TCATTGAAAC GGTGGATATC
AACGAGTTTT CAGATGATGA ATGGAAAGTC GCTCAGTTTC GATTCGAATG TATCCGGCCT
CTATTAGATG ATCCTTTTCG AACACGGAAG AAAGCCGAGA GTGTTGCAGA GGAAGCAGGA
GTACATGTGG CTACTTTATA TAGTTGGCTG CGTGCGTATC AAAATGATGG CCATTTATCG
TCTTTGATTC CTCAGGCTAG AGGTCGCAAG GAAGGCAAGA CGCTCATAGA TCCAGTTCTT
GAGGAAATTA TCGCATCTGC GATTGATGAA TTTTACTTAA GTAAACAGCG ATACACGCCG
GCTGATGTTA TTGAAGAGGT TAAGGTAATG TGCCGTATTG CGGGCGTAAA GCCTCCGCAT
GCAAATACAG TACGTGCCCG TATTAAAAAA ATCAGCGAAA AAGAAGTATT AAAGCGTAGG
GGGCGCCGCG ATAAAGCAAG AGACCTATTT GATCCGATTA AAGGCCCATT TCCAGGCGAT
GACTTTCCTT TGGCGGTTGT ACAAATTGAT CATACTCAAG CAAATGTCAT TGTGGTTGAT
GAAAAAACTC GAGAAGAGCT GGGGCGCCCT TGGCTAACTT TGTCGATTGA CGTCTGGAGT
CGAGCAATAT TAGGCGTTTA TGTCAGTATG GATGCTCCTA GTGCTACGGC TGCTGGCATC
TGCATAGCGC GATCGACGCT ACCAAAAACG GAGTACCTCG CCAACCTCGA TGTTCCCGGA
GAGTGGCCTA TGTGCGGGAA AATGAGAGCG ATTCATGTAG ACAACGCGAG AGAGTTCCGC
GGAGAAATGC TAAGGAAAAG CTGCCAGCAA TACGACATGG ATTTGACCCT TCGTCCCGTC
AAAACTCCCC ACTATGGGGC TCATATCGAA CGGTATATGG GGGTTGCCTC ACGGTTATTG
CATAAATTGC CTGGTACTAC TTTTTCTAAG CCTGAAGATC GTAAAGGATA TAATTCGGGA
AAGGAGGCTG TGATGACTCT ACACGAGGTG GAGCAGCACC TTGTGGATTT TATCGTTAAC
GTATACCACC AAAGGATACA TAGTTCAATC AATGTTACAC CCAAAAGAAT GTGGGAGCTT
GGTGTTTTGG GTGATGATGA TCGGCCTGGA GTAGGTTTAC CGGATATTCC TGCAGATCCA
GATCGCTTTG TCTTGGATTT TTTACCGTAC GAAACACGGA GTGTTCAAAA TTATGGAATA
CAAATAGATT GTATTAACTA TTATCACGAA GTGCTTAATA GGTGGATAAA CTCGAAAGAT
CCTAATGACG ATCGCAGGAA AAGAAAATTT ACTGTGAGAC GTGACCCAAG GGATATTTCA
AAAATATTTT TCTTTGATCC TGACATTAAA TCTTACTACG TCATTCCCTA CAGAAACACG
TCCTTTCCTC CAGTCAGCAT TTGGGAGCTG AGAGAGGCAA GAAGAAAACT TATCGAAGAT
GGCGTTAAAC ATGTAGATGA AGATTTAATA TTTAATGCGT TAATTAGAAT GAAAGATCGA
GTTGATGAAG CAAAAAAGAA AACTAAGCTG ACTAAGTTAA AAGCGCATAG AAATGAAAGG
GCAAAAAAAC TTTCTAAAGT GACTTCCCCA TCTGAAATAA TTAGTGTGGC CCTCCCTAAG
CCTAATGACG AAAAATTTTT TGTTCAAGAT CAAGAAGAGT CTGAAGACAT ATTCTCGATG
CGTGAAGAAT TTTTCTCCGA TATAAGAAGG AAATAA
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| Protein sequence | MDTVLGENLN DKTVKKLRID RLRRLTEAES GEALIETVDI NEFSDDEWKV AQFRFECIRP
LLDDPFRTRK KAESVAEEAG VHVATLYSWL RAYQNDGHLS SLIPQARGRK EGKTLIDPVL
EEIIASAIDE FYLSKQRYTP ADVIEEVKVM CRIAGVKPPH ANTVRARIKK ISEKEVLKRR
GRRDKARDLF DPIKGPFPGD DFPLAVVQID HTQANVIVVD EKTREELGRP WLTLSIDVWS
RAILGVYVSM DAPSATAAGI CIARSTLPKT EYLANLDVPG EWPMCGKMRA IHVDNAREFR
GEMLRKSCQQ YDMDLTLRPV KTPHYGAHIE RYMGVASRLL HKLPGTTFSK PEDRKGYNSG
KEAVMTLHEV EQHLVDFIVN VYHQRIHSSI NVTPKRMWEL GVLGDDDRPG VGLPDIPADP
DRFVLDFLPY ETRSVQNYGI QIDCINYYHE VLNRWINSKD PNDDRRKRKF TVRRDPRDIS
KIFFFDPDIK SYYVIPYRNT SFPPVSIWEL REARRKLIED GVKHVDEDLI FNALIRMKDR
VDEAKKKTKL TKLKAHRNER AKKLSKVTSP SEIISVALPK PNDEKFFVQD QEESEDIFSM
REEFFSDIRR K
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