| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0179 |
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| Symbol | |
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| ID | 3967963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 222279 |
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| End bp | 223445 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919238 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_525655 |
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| Protein GI | 90019828 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0264145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAACT TTTATAAAAG TACTGCTTTA TCGTTTTTTG CGTTGGTTCT GTTAACTGCA
GCATGGGTGT GGCTGTGCAA TAGCAAAATG GAATTGGTTC ACGAGCTGCT TCCCGCAGAT
TCGAGTACAA TTCCTTGGCA CTTTCATGCA CTTACTGATA TTGAAAAAGG AGGAAGTTCT
TCCATTCAAA TTAACGATTC CGAACAAACC ATTAACTACA CATACGTACT CACCGACAAA
ATAACATACC CCCATGCCAC AGTATTTATT GCCTTCGACC TTCTGAATAA TGCAGCGCAC
TACGTTGACC TGCGCCGCTA TTCAAAAGCT GCGTATAAAT TAAAGTGCAA TCCAGAAAAC
ATCTTATCGC TGCACCTCCA CACTTTTGAT CCAAAGGTTA CACAGGTGTC TAATTTATCT
AGCTTTCGCA TATCTGAGAG TTTTGGCCAC TGCGGTGAAC AATGGACCGA AATTGAAGTC
GATCTACACC ATCTCAACGT ACCCGCTTGG TGGCTGAACC AATTTGCGCT TAATAATTCA
GAACAGAGCT ACCAATTGGA GCAGGTGCTG GCATTTTCTA TCGGCGCGTC CAAACAAGGT
CCAATAAATA CACCTGCACA AGTAAGTGTA CACAGGCTCA CTTTGTACGG GCAGGATACT
CGTTGGTTTT GGTTGGCATT GTTTGTAACA GTAATACTTT GGTTCTCGGC CATTACCGTT
ATGTTAAGAG CCTACACCAA AGCATTAACA AAAGACGTGC GCAAGAGAAT GAAGCAGAGC
CTGCCCCTGT TAGCATTTAA AGATATATCG ATCGAACCGC TAAAAGAAAA CTCGCAACTG
ACTATTTTAC TGCGATTTAT AGCAACTGCT TACAATATCC CAGAGATTAG CCTAGAGTAC
ACGTCTGCTA AAACTGGTAT AGATCGCAAT ACCATAAATA GGCTTATGCG TGCTGAACTA
GGCTTAACAT TTAATGCCTA CGTAACCAAG CTTCGAATGG TAGAAGCCGC CCGCATCCTC
CAGTGCGAAG GAGACATTCA AGTGACAGAA TTAGTCTATA AGCTAGGCTT CAAAAGTGTT
GCTCACTTTT ACAAACTATT CAAGGATGAA TATGGTTGCA GCCCCAATAA ATTTAAGACC
ATCCAAACAG AGGCGTTGAC AAGATAA
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| Protein sequence | MLNFYKSTAL SFFALVLLTA AWVWLCNSKM ELVHELLPAD SSTIPWHFHA LTDIEKGGSS
SIQINDSEQT INYTYVLTDK ITYPHATVFI AFDLLNNAAH YVDLRRYSKA AYKLKCNPEN
ILSLHLHTFD PKVTQVSNLS SFRISESFGH CGEQWTEIEV DLHHLNVPAW WLNQFALNNS
EQSYQLEQVL AFSIGASKQG PINTPAQVSV HRLTLYGQDT RWFWLALFVT VILWFSAITV
MLRAYTKALT KDVRKRMKQS LPLLAFKDIS IEPLKENSQL TILLRFIATA YNIPEISLEY
TSAKTGIDRN TINRLMRAEL GLTFNAYVTK LRMVEAARIL QCEGDIQVTE LVYKLGFKSV
AHFYKLFKDE YGCSPNKFKT IQTEALTR
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