Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0146 |
Symbol | |
ID | 3965376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 179644 |
End bp | 181602 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637919205 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_525622 |
Protein GI | 90019795 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGCA TTGCTGGCCT AGTTAGCCCA AGCTTACCGA TAGACTCTTT GAAAGCAACT GCCACAGCTA TGGCACAGGC CATAGAGCAC CGCGGCCCAG ATGCAATGGG TGTGTGGGTA GAACAAGAGC AAAAATTAGC TTTTTCTCAT AGACGACTAT CAATTCAAGA TTTGAGTGAA TCTGGTGCGC AGCCAATGCA TTCCCATAGC AAGCGCTACA CCATTGCTTT TAATGGTGAG ATATACAATT TTCTTGAAAT TAAAAAACCA CTCATAGACG CAGGGTTTGA ATTTAGGGGC CATAGCGATA CCGAAGTGTT GCTATGCGCA ATAGAGCATT GGGGGTTAGA GCAAACCATA GCAAAAGCGA AAGGTATGTT CGCCATAGCT CTTTGGGATA GTCAGACTAA GGTGCTTACT TTAATACGCG ATCGCATAGG TGAAAAGCCA CTTTATTACG GCGTTATAAA TGGTTCTTTT GTTTTTGGGT CAGAGCTTAA AGCCATATTT GCCCATACGC CTGCTAAAGC GCTTACGCTA AATAAAGTGG CTATCGCTTC GTTTTTGCGT CACGGCTACA TCAGTGCCCC TAACTCGGTA TTCGTAGAAG TTAAAAAGCT TTCACCAGGT TGCCGTATAG ATATAAACCT AGCCAAACAA AGCGATTGGT CGATTGCGAA CCTTACGCCA CAGCCGTATT GGACAGTTGC GCAAAGTGCT AATCAACCTT ATTTATATAC CGAGCAAAAT CAAAGCGAAG CAATAAGTGC ACTGGATGAA AAAATTAACA AGGTTATTAA TGAGCAATCT ATAGCGGATG TACCACTTGG CGCTTTCTTG TCTGGTGGTA TAGATTCGAC CGTTGTAAGT GCTGTGTTAC AAGCGAACAC CAGCACAGCA ATAGATACTT TTACTATTGG TTTTGAAGAA AAGTCCTTTA ACGAAGCTGA ATTCGCCAAA GAAATTGCGA AGCACTTAGG CACCAAGCAT CACGAGCACT ACGTAAATCA GCAAGACATA CTAGAGCTAG TTAATATATT GCCTCGTGTA TACGATGAAC CCTTTGCAGA TGCCTCTCAG CTACCCACTA TTCTAGTTAA TCGCTTCGCT CGAAGTGAAT TAACGGTATG CCTATCTGGC GACGGCGGCG ACGAGTTATT TGCCGGGTAC AATCGCTATG TATTTACAGA AGCTGTACTG AAAAAAGCGG CAGCTCTACC CGCGGTATTT AAATCGATAC TAAAAGCGCT AATTACCAGC GTAGCGCCGG GTAAATGGGA CAAGCTCTAC CAAGCGCTTA ACAGTATTGC TAAACGTAAA GGCGGCGCAG AGTTTGGAAA CAAGCTTTAT AAAATGGTGT CTTTGGCCGA TGCTAAAAGT AAGGCAGCAG CCTACGAATA TTTGATGAGC TATTGGCAGC AACCGGAGCA AGTACTAAAA GCTTTTAATG GTGAGCTTGC AATGCAGTCG CCATTAAGTT TAGAAGACGA TTTTATAAAT GCAGCCATGG CATGGGATCA ACAGTGGTAT CTACCCGGGG ATAACCTTAC CAAAACAGAC AGAGCGAGCA TGGCTGCGAG TTTAGAGCTG CGTGCGCCCT TGTTAGATAT TGAGCTTATA GATTTCGCCT GGACGGTGTC ACCAGAGCTA AAAGTAAGGG ATGGTAAATC CAAGTGGTTA CTGCGTGAAG TGCTTTATAA ATATGTGCCC AAAGAGCTAA TAGAGCGCCC TAAAATGGGT TTTTCTGTAC CAATCAGCCA ATGGATAAGA ACCGATCTGT CTGCATGGGT AGACGAATTA TTAGATAAAG AGTTCATAGA AAAGCAGGGC ATATTTAATT ACGCACCCAT TCAGCATGCT TTATTAGAGC ATAGATCTGG CAGTTACGAT CACGGTAAAA AACTGTGGAC CCTATTAATG TTTCAAGCAT GGTTTAAAAC CAATATTATC GATGGGTAA
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Protein sequence | MCGIAGLVSP SLPIDSLKAT ATAMAQAIEH RGPDAMGVWV EQEQKLAFSH RRLSIQDLSE SGAQPMHSHS KRYTIAFNGE IYNFLEIKKP LIDAGFEFRG HSDTEVLLCA IEHWGLEQTI AKAKGMFAIA LWDSQTKVLT LIRDRIGEKP LYYGVINGSF VFGSELKAIF AHTPAKALTL NKVAIASFLR HGYISAPNSV FVEVKKLSPG CRIDINLAKQ SDWSIANLTP QPYWTVAQSA NQPYLYTEQN QSEAISALDE KINKVINEQS IADVPLGAFL SGGIDSTVVS AVLQANTSTA IDTFTIGFEE KSFNEAEFAK EIAKHLGTKH HEHYVNQQDI LELVNILPRV YDEPFADASQ LPTILVNRFA RSELTVCLSG DGGDELFAGY NRYVFTEAVL KKAAALPAVF KSILKALITS VAPGKWDKLY QALNSIAKRK GGAEFGNKLY KMVSLADAKS KAAAYEYLMS YWQQPEQVLK AFNGELAMQS PLSLEDDFIN AAMAWDQQWY LPGDNLTKTD RASMAASLEL RAPLLDIELI DFAWTVSPEL KVRDGKSKWL LREVLYKYVP KELIERPKMG FSVPISQWIR TDLSAWVDEL LDKEFIEKQG IFNYAPIQHA LLEHRSGSYD HGKKLWTLLM FQAWFKTNII DG
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