| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0132 |
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| Symbol | |
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| ID | 3967586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 163930 |
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| End bp | 164550 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919191 |
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| Product | putative polysaccharide export protein, outer membrane |
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| Protein accession | YP_525608 |
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| Protein GI | 90019781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.679141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAC TACTTAAAAT AGCCGGCATA ATTGCCATGA GCTTAACGCT CTGGAACTGC
GGCTCGCCCG CCACACCCAG CGTAAAGCCC AGCATGAACG TAGCCAGCAT TACCGATGAG
TACCGCATTG GTAACGGCGA TGCCCTGCAA ATTAACGTTT GGAAAAACCC AGAGTTATCT
GTTGCCGTAC CCGTGCGCCC AGATGGCAAA ATCTCTTTGC CTTTGGTGGG TGATATCACC
GCTTCTGGCG AAACCGCGCA GCAGCTGGGT GCAAATATCG CCACTAAGCT CAATTCATTT
ATTCGCAACC CGCAAGTTAC CGTTATTGTA ACCAACCCAA GCAGCGCCGA CTTCCAGCGC
CGCATTCGCG TTACCGGTGC GGTTAACCAG CCAATTTCTG TTCCTTACCG CGAGGGTATG
ACCATTCTCG ACTTGGTACT AGAAGCCGGT GGCGTAACTG AATTTGCCAG CGCAAACAAA
GCCAAGTTAT ACCGCAAAGA AGGCGACAGC GTAAAAGTTT ACCCTGTGTA CCTCAACGAC
ATTCTAAATA AAGGTAAGTT GGTAACAAAC TATCAGCTTG TACCTTCCGA TATAGTCACT
ATTCCAGAAA GAGCTTTTTA A
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| Protein sequence | MKSLLKIAGI IAMSLTLWNC GSPATPSVKP SMNVASITDE YRIGNGDALQ INVWKNPELS
VAVPVRPDGK ISLPLVGDIT ASGETAQQLG ANIATKLNSF IRNPQVTVIV TNPSSADFQR
RIRVTGAVNQ PISVPYREGM TILDLVLEAG GVTEFASANK AKLYRKEGDS VKVYPVYLND
ILNKGKLVTN YQLVPSDIVT IPERAF
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