| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0098 |
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| Symbol | |
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| ID | 3965998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 118528 |
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| End bp | 122172 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919157 |
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| Product | hypothetical protein |
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| Protein accession | YP_525574 |
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| Protein GI | 90019747 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAA AGAAAGGCGT TTTTGTAAAC TGGGGTAATA TTCCCCACTT AGAGTTCGAT
TTTGGGCCAA TTAATTTATT TTCTGGCGGT AACGGCTCGG GTAAAACCAC AGCGGCCGAT
GCGATTCAAA CCCTAATGAC CGCCGCCCAC GAAAACCTGT TTAACTACAA CCCCGGGCAA
GATGAAACAA CTCAAAAAGG TCGCGGAGGC AAACAGGTGC GTACGCTGGC CTCTTATGTT
TTAGGGTGCG ATGACGGCAG CTACGCTCGC CCCTGGCCAA CCGATGGCTA TGTGGCAGGT
ATTTTCCACC CTACTCAGGG CGAAACCGGC GAAGTGTTTA CCGCGGTTAT GTGTATTCGC
GCGCATGTAG ATAGCGCAGG TAACCAAAAG CAGGCGCGGC AAGATGATTT ATTTTTCGTT
ATTGTGCCTG GCGAAGAGCT TACCCTCTCG CATTTTGTAA AAACCTATTC CGACGGCAAA
CACGTAGTAC CCATTAACAA TATTACTACC TTACTTAAAA AAGAGTACGG CGCAAAAGCC
ATAGAAGTGT ACGACAAAAA AGGGGCGTAC CTGCGCCGCT TATACGGTGC ACTGCGCGGC
AGACGCGATG CGGTATCCGA CCGAGAAGCC AAACACGCGG CGCGCACCTT CTCTAACTTT
ATGGCCTATA AACCGGTAAA AAGTATTACC GAGTTTGTTG CGCGCGAAAT TCTAGAGCCA
AAAGATTTAG GCGATGCAAT CCGCAACGTA TCCGAGTTAA TGAAAACCAT TAACCAAATG
GAATCGGATA CCAAACATAT TCGCGATTCT ATAGATCGCC TAGGCCAAGC CAATGGCGCA
GCCAGTAAAT ATGTAGATAC TTGGGTCGAG CGCAACCTAA CCCAATACGC CGAAGCCACG
CGTTTACTTA GCGTAAACCA CACCAACTAT ATTGCCGCTA AAAACGAACA GCAAAATATT
CGCGAAGGCA TAGAAGAAAA CGAAGAGCGT CAGCGTATTT GCGAACAGCG CAAGCAGCAG
TTCCACGATG AGCGAGTTGC GTTAGAGGCA CAGCGCCAAG GCATTAGCGC ACTAAAAGAT
AAAGATCAAC TAGAGCAAAC TATTGCCGAT CGCACCCGCG AGCTGGGCGA AAAAGCGCGG
CCCTTGTTGG AGCAAAGCCA GCAGTTGGCA AAAAACCTAG ACGCAACCCA AAAACTAATG
GGCCAGTTGT CTGAATGTTC CCTCGCCATA GAAATTCCCC AATTAGATAG TCGCGACTTT
AGAAAACAGG CGAAGGCCGT TACCGCAGCA GAAAACCAAG TAGATATAGA TCTATCGCGG
CTGCTAGCCA AAGACTGGGT GGGCATAGAG CAGCTAGAGC AAGATTTGGA TCACATTCTA
TCGGCCGATG CATTGCATCG TCGCTGGGCA GAATATTTAC ACACCAGCGA GCGCACCGGT
GGCAGCAGCA GTATTCGCGA TCAAATATCG CTGTATTTAT CGGGCAGCGA TCGCCGCCGC
CAAGATTTAA TAAACAAGCA AAAACAAAAG CAAAAAGAAA TTCAGCTGCT TGAAAGTAAA
AAGGTAAGTT ACCCCGCCTA TGTCGAAACA GCGTTGGCAG CTATAAATAA AGCCTGCCCG
CAGGCCGAAG CGCGGGTATT GTGCGACTAC ATAGAAGTGC TAGACCCAAC GTGGCAAATG
GCCATAGAAG GCTACATAGG CGGTGCGCGA TTCTCCATTA TTGTAGAACA AGCCTACGAA
GCCGAAGCCA TGCGCATAGT GCGCGCACTG CCCGATGCAC GGCGCAACAA GGCGCGCGTT
ATTCAGGGTT ACAAAGCCCA GCGCGATGCC GAGCGCATTA GTTTACCGCG CGACTCCATT
ATTGATGTAA TGGCTTTTAG CCACAAAACC GCCGAATTTT ATTTGCGTGC CTCTTACGGC
AGCGTAGTGC GAGTAGACGA TGCCGAAACA CTGCGCACCA CCGCGCGCGG GGTTACGCCA
GAAGGTTTAG GGTCTGGTAG CTACAGCATG TGGCGCTGCG ACTTAAACGA CAGCGAATTG
GTATTTGGCC AAGGCGCACG CGAGCGCGCA TTAAAAGCCA AAGAACGCGA ATATCACCAA
CTTACAGAAG ATGCCAACAA CGCAGAGCAA GATTACCAGC GCATAGCCCG CATTTTTGAT
TTGGTGGATG CCATTAAGCC CGTGCACTGC GGCGATTTAA TCCAAGGGAT GTTGGAATTG
CACCGCCAAA TAGGCCAGGC GGAATCGGCC TTGTCGCGCT TAGACTTAAG CGATTTTACT
CAGCTAGAAG AGCAGCTTGC CAACTTAAAA GCGCAGTATG CCGAGCAAGA AAAGCAATCG
CGCAACTTGG GTGAAGAGTC TGGCCGCTTA AAAGAAAAAG CGCGCCAGTG CGAGCGCAAA
GTAAAAGATT ACGCCGATGC CGAAGAAAGC TTGCAAACCG TGCAGGAGGA ATTCGAAAAA
GCGGTGTACA GCATGGCAGA GTTATACCCG CAGGTAGATA CCAACCTTGC ACTGCAGCAA
GCCGATCAAA AAGCGCAGCA AGCGGGCAAA GATTTTAGCT TTGTGGATGA AGTAGATACC
CTCACCAAAC GCTTAGAAAG TGCCGAGCGC GAGCTATACA ACGCTATTAT GACCCATAAC
CAGCAGTGCA ACAGCCAAGA TGCCGTGGTG TACGATACCG GCGTGGGCGA GGTGCACGGC
GAAGGCTTCT TCAAAGCCAT ACTGGGCTTA AATGAGCAGG TAGAGCTTAT TCGCAACCGC
TTAAAAAACA ACGTGTTGGT GGATAAATTC GGCCAGCTCA CTAGCCTAAA AGACAGTTTT
AATACAGCGT TTGTCACAAA CCTTTGCCAT TCTATTTACC AGGCAATTTG CGATGGTAAA
AAGATACTCG ACGATCTAAA CCAAGAATTA GAGCATCACC GTTTTGGTGC AGACCGCGAG
CGCTTTTATT TCGGGTATGA ATGGGTACCC GAATTTCGCG ACTATTGGCG TTTTTTCAAA
GAAGTTATCG ACGTACCCAA CCTAGGCGAC GGCACCAGCC TGTTTGAAGC CGAACTTTCT
GAAAAAGCCT GTGGCGTGCG CGACCAAATG TTAGCTATGC TATTAGATAA AGACGAAACC
GTAGCCATGC GCGAGCTAAG CCGCATAAGC GATTACCGCA ACTACCGTTT CTACGAAATT
TATAAAGAGC CGCAGGGCAA AGCCCCTATC GCCCTAAGCC AATACGGCAC TGGGTCTGGT
GGGCAGCTAG AAACCCCTGC CTACATTATT CGCTCGGCGG CGGTCACATC GGCTTTCCGC
TTTAACGAAG GCAATAACCA CCTGCGCATG GTGTTAGTGG ACGAGGCCTT CTCCAAAATG
GACGAAACCC GCTCGCGGGA AGTGATTAAC TATTTAACCG AAACATTGGG CTTGCAGTTA
CTGTTTATTA TGCCCACCAG CAAATCTGGC CCGTTTATGG ATTTAATTAG CAATCAGTTT
GTGTTTAGTA AATGCCCCAC AACTAGCCCC ATAGGCGAGC TAAAAACGCG CGTGCTTGTG
GATCGCAAAA CCTGTAATCA AGAAAAAATT AAACAGCTGT GGGCCAACCA TCGCAAAACT
ATTCGCAGCC AAGCCATGTT AGATTTTATG GAGGACATAA CCTAA
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| Protein sequence | MFLKKGVFVN WGNIPHLEFD FGPINLFSGG NGSGKTTAAD AIQTLMTAAH ENLFNYNPGQ
DETTQKGRGG KQVRTLASYV LGCDDGSYAR PWPTDGYVAG IFHPTQGETG EVFTAVMCIR
AHVDSAGNQK QARQDDLFFV IVPGEELTLS HFVKTYSDGK HVVPINNITT LLKKEYGAKA
IEVYDKKGAY LRRLYGALRG RRDAVSDREA KHAARTFSNF MAYKPVKSIT EFVAREILEP
KDLGDAIRNV SELMKTINQM ESDTKHIRDS IDRLGQANGA ASKYVDTWVE RNLTQYAEAT
RLLSVNHTNY IAAKNEQQNI REGIEENEER QRICEQRKQQ FHDERVALEA QRQGISALKD
KDQLEQTIAD RTRELGEKAR PLLEQSQQLA KNLDATQKLM GQLSECSLAI EIPQLDSRDF
RKQAKAVTAA ENQVDIDLSR LLAKDWVGIE QLEQDLDHIL SADALHRRWA EYLHTSERTG
GSSSIRDQIS LYLSGSDRRR QDLINKQKQK QKEIQLLESK KVSYPAYVET ALAAINKACP
QAEARVLCDY IEVLDPTWQM AIEGYIGGAR FSIIVEQAYE AEAMRIVRAL PDARRNKARV
IQGYKAQRDA ERISLPRDSI IDVMAFSHKT AEFYLRASYG SVVRVDDAET LRTTARGVTP
EGLGSGSYSM WRCDLNDSEL VFGQGARERA LKAKEREYHQ LTEDANNAEQ DYQRIARIFD
LVDAIKPVHC GDLIQGMLEL HRQIGQAESA LSRLDLSDFT QLEEQLANLK AQYAEQEKQS
RNLGEESGRL KEKARQCERK VKDYADAEES LQTVQEEFEK AVYSMAELYP QVDTNLALQQ
ADQKAQQAGK DFSFVDEVDT LTKRLESAER ELYNAIMTHN QQCNSQDAVV YDTGVGEVHG
EGFFKAILGL NEQVELIRNR LKNNVLVDKF GQLTSLKDSF NTAFVTNLCH SIYQAICDGK
KILDDLNQEL EHHRFGADRE RFYFGYEWVP EFRDYWRFFK EVIDVPNLGD GTSLFEAELS
EKACGVRDQM LAMLLDKDET VAMRELSRIS DYRNYRFYEI YKEPQGKAPI ALSQYGTGSG
GQLETPAYII RSAAVTSAFR FNEGNNHLRM VLVDEAFSKM DETRSREVIN YLTETLGLQL
LFIMPTSKSG PFMDLISNQF VFSKCPTTSP IGELKTRVLV DRKTCNQEKI KQLWANHRKT
IRSQAMLDFM EDIT
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