| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0080 |
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| Symbol | |
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| ID | 3967319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 101735 |
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| End bp | 102109 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919139 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525556 |
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| Protein GI | 90019729 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTATTG CACATACAAT TTTAGTGGTC GAAGACAATC CCGATAACCA GCAGTTAGTA
ACTTGGATTT TAGAAGACGA AGGGTATACG GTTGTATGTG CAGACACAGC AGAAGACGGG
TTAAAGTTAC TGGAATCGCA CAATTTCACA CTTATTCTGA TGGATATTTC TCTACCCGGC
ATGGATGGCA AACAGGCAAC GCAGCAAATT CGCAACACAC CCGCTATTGC TTCTATTCCA
ATTATTGCCC TCACCGCACA TGCAGTGCAG GGTGAGCGCG AAAGTATTAT GGCCAGTGGC
GTAGACGAGC TACTTACCAA GCCGCTAGAT GAGGTTGCTT TAATACAAAG AATTAAAGAG
ATGATTAACC GTTAG
|
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| Protein sequence | MSIAHTILVV EDNPDNQQLV TWILEDEGYT VVCADTAEDG LKLLESHNFT LILMDISLPG
MDGKQATQQI RNTPAIASIP IIALTAHAVQ GERESIMASG VDELLTKPLD EVALIQRIKE
MINR
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