| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0071 |
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| Symbol | |
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| ID | 3967155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 89135 |
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| End bp | 90976 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919130 |
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| Product | Outer membrane protein/protective antigen OMA87-like |
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| Protein accession | YP_525547 |
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| Protein GI | 90019720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.299818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGTTTA AATTTAAAGC ACCAGTCTTT TCTAGTGCTG CTTTCATCGG TTATTTGATA
TACGCGGCAC TCTTACTTGG AAGTAGCGCT TCCGCACATG CCCTTGGCCT AGATATTTTT
AGCAATACTT CTTCGTACAC GCTTACGCTA AACAGCCCAG AAAGCGACAG CGCCCGCAAA
GCACTCGAAG AAGAGCTAAA CAGCCGCCTA AAAGAAAACC TGCGCTACCA GCCAAAATTA
AAAACCATGC CGGCAAGGCG TCGCGTAAAA GAAGAAGTAG AAGTATTAGA AAAAACCCTC
ACTTCTATGG GCTACTATTC TGGCGAGGTT AACTACCGTA TTTTTCACGG CCAAGCCGAA
GACGATAATG CCACTATTGA ATACAGCGTA GATTCTGGCG CGCAGTACAA AGTAAGCAAA
ATTGCGTTTA ACTTCCCCAA ACATGTTGCC AAACCCAGCA ATATACCTTT GCAAACAGGT
GACGCAGTTA AAGCGCAATC GGTACTTGGT GCCCAGGCGT TTATAGAAAA TTATATAAAT
GACAATTACT GCCTGTACGA AATAAACCTA AGCTACAACG TTACTTTACA CGCCAGCAAG
GCGGGGGCAG ATATTGTATT TACCCTGCAA CAAAGCCCAG ATGCCCTATT TGGCGAAATC
AGCTTCAAGG GCCAAACTAG CATCAAACTC GATTATTTGA CCCGCCAAGC CAAACTAGAA
CCAGGTACCT GCTTTAAGCG TAAACAGGTT GATGAAACGC GATTGCAGCT ACTGCAATCT
AATTTACTGG TTAGCGTAGA TTACAAATAC GATCTCAACC CCAGCTACAA CCCCGACGTG
GCCAGCAAGG TAGACATAAC TTTTCACCTT AATGAACGGC ACCATCGCAC GGTTAAAACA
GGTTTAAATT ACAGTACCGA CGGCGGCCTG GGCATGCAGG TGGGCTGGGA GCATCGCAAT
TTATTTGGCA GTGCCGAAAA CTTATCGTTA GACACTGGCT TTAATGAAAT CTCGCGCTTT
GCTACCGGCC GCTATATTTT GCCGCGCTTT ATTATCGACA ACCAAGACCT TACCCTGCGC
TCACACTTTG AACGCGAAAC AACCGACGCT TACGATTCCA CCCGTGCTGA AGGCAGCGGG
ATTGTGGCGC GTCAGTTAGG CGACCACACC AGTGCCGAAG TGGGCTTAGC GCTAACCTAT
GCAGATATTG TGGAAGCCGA GCAAAGCGAA ACCTATAACC TTATTTCTAT TCCGGTGGGC
TTTACCTACG ACTACCGTAA TAGCTTACTC AATGCCACAC GCGGCTGGAT GTTTAACACA
AGCCTCACAC CGTTTGCCGA TATAAGCAAA CAAGACACAC GCTTTATGCG CTGGACAGCC
ACCACCAGCG TATATGCATC TAAAACCGAC TGGGCGATGA GTCCAACGGT AGCACTGCGC
GTTTCCACCG GCTCTATATC GGGCGCGGCA TTAAACGATG TGCCAGCCGA CCAACGTTTT
TATGTGGGCG GCGGCGGCTC GGTGCGCGGC TACAGTTACC AAAGTTTGGG CGAGCTTACC
GAATCCGAGC CAGATGGCGG TAAATCCTTT GGCGAAGTTT CTGCAGAGTT GCGCACTCGC
TTTGCCGGCA ATTGGGGCTT AGTACTTTTC TTAGATGGCG GCTATGCCTA TGCCAGTGAA
GCACCCGCTT TTGGTCACGA CTTTTTATGG GGCGCGGGTT TAGGCTTGCG CTATCACACA
AGCTTTGCCC CTATTCGTGT GGACTTTGGT TTTCCATTGG ATAAACGCGA AGGTATCGAC
GACAGTTTCC AGCTTTATAT TAGTATTGGA CAAGCATTTT GA
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| Protein sequence | MLFKFKAPVF SSAAFIGYLI YAALLLGSSA SAHALGLDIF SNTSSYTLTL NSPESDSARK
ALEEELNSRL KENLRYQPKL KTMPARRRVK EEVEVLEKTL TSMGYYSGEV NYRIFHGQAE
DDNATIEYSV DSGAQYKVSK IAFNFPKHVA KPSNIPLQTG DAVKAQSVLG AQAFIENYIN
DNYCLYEINL SYNVTLHASK AGADIVFTLQ QSPDALFGEI SFKGQTSIKL DYLTRQAKLE
PGTCFKRKQV DETRLQLLQS NLLVSVDYKY DLNPSYNPDV ASKVDITFHL NERHHRTVKT
GLNYSTDGGL GMQVGWEHRN LFGSAENLSL DTGFNEISRF ATGRYILPRF IIDNQDLTLR
SHFERETTDA YDSTRAEGSG IVARQLGDHT SAEVGLALTY ADIVEAEQSE TYNLISIPVG
FTYDYRNSLL NATRGWMFNT SLTPFADISK QDTRFMRWTA TTSVYASKTD WAMSPTVALR
VSTGSISGAA LNDVPADQRF YVGGGGSVRG YSYQSLGELT ESEPDGGKSF GEVSAELRTR
FAGNWGLVLF LDGGYAYASE APAFGHDFLW GAGLGLRYHT SFAPIRVDFG FPLDKREGID
DSFQLYISIG QAF
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