| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0065 |
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| Symbol | |
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| ID | 3967149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 80594 |
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| End bp | 81997 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919124 |
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| Product | NhaD family Na(+)/H(+) antiporter |
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| Protein accession | YP_525541 |
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| Protein GI | 90019714 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.249697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT GCATTATTGT TATTTGGGCG GGTGTGTTGT TTTTGTTTCC TGCGCTCGCT
TCTGCCGCTG CCAGCTCTCA TGTAGCTCTC GACCTTACTC ACCACTGGGT GGGGTTTGTT
GCGCTTGCTA TATTTGTTGT GGCTTATACG CTGGTTATAT TTGAAGAGCA GCTGCATATG
CGCAAGTCCA AACCGGTGCT GCTCGCGGCC GGGCTTATTT GGGTGCTTAT TGCCTTTGTT
TACAGCGGCC AAAGCGATCA TCACAGTGCT GAAGAGGCCA TACGCCATAA CTTTTTAGAA
TACGCCGAGC TATTCTTTTT CTTACTCGTG GCCATGACCT ATATAAACGC CATGCTAGAG
CGTGGCGTTT TCGATAGCCT GCGCGATTGG CTAGTGCTTA AGGGCTTTAG TTACAAAAGT
TTGTTTTGGC TTACCGGCTT TTTAGCTTTT TTTATATCGC CCGTAGCAGA TAACCTAACC
ACCGCGTTAA TTATGTGCGC AGTAATTATG GCGGTAGGTA AAGACAAGCC CCAGTTTATT
GCCATAGGTT GTGTGAACAT AGTTGTAGCC ACTAACGCAG GCGGTGCGTT TAGCCCCTTT
GGCGACATTA CAACTTTAAT GGTTTGGCGA AAAGGTATTA TTGAGTTTTT TACCTTCTTT
AATTTGCTAT TACCCTCACT GGTTAATTTT GTTATTCCCG CTGCAATTAT GCACCTTGCC
CTACCCAGCG GGCAGCCAGC AGTGGTAGAG GATGAACCAG AGCAAATGAA AACCGGTGGT
TTGGTTATTG TTGGCCTGTT TATTCTTACC ATTGTTACTG CGGTTAGCTT CCATAACTTT
TTACACCTGC CCCCAGTATT TGGCATGATG ACAGGGCTTG CCTATTTAAA GCTGTTTGGC
TATTACCTAC GTAAAAAGGG CCGATCTCAA TTTGACCATT CTGATATGCC AACTAACCAC
AAAATTGAAG ACGACTTTGA TATTTTCGAC AAAATCGCTA AGGCCGAGTG GGATACATTG
TTCTTTTTTT ACGGAGTAAT TCTTGCCGTT GGCGGCTTGG GCTTTATTGG TTACTTGGGT
ATGACATCGG CATTTATGTA TGGTGAGCTT GGCCCTACAA CCGCGAATAT TTTAGTGGGC
GTTATGTCTG CCATTGTGGA TAACATTCCC GTTATGTTTG CGGTATTAAC CATGAACCCC
GCTATGAACG AAACTCAATG GCTGCTGGTA ACGTTAACGG CAGGCGTTGG CGGTAGCTTG
TTATCTATTG GCTCTGCGGC AGGAGTGGCA CTTATGGGCC AAGCCCGCGG TTTTTATACT
TTTTTTAGCC ACTTAAAATG GACACCCGCT ATTGCACTGG GCTACGGCGC AAGTATTTGG
GTACATTTTT TAATTAATAG TTAA
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| Protein sequence | MKHCIIVIWA GVLFLFPALA SAAASSHVAL DLTHHWVGFV ALAIFVVAYT LVIFEEQLHM
RKSKPVLLAA GLIWVLIAFV YSGQSDHHSA EEAIRHNFLE YAELFFFLLV AMTYINAMLE
RGVFDSLRDW LVLKGFSYKS LFWLTGFLAF FISPVADNLT TALIMCAVIM AVGKDKPQFI
AIGCVNIVVA TNAGGAFSPF GDITTLMVWR KGIIEFFTFF NLLLPSLVNF VIPAAIMHLA
LPSGQPAVVE DEPEQMKTGG LVIVGLFILT IVTAVSFHNF LHLPPVFGMM TGLAYLKLFG
YYLRKKGRSQ FDHSDMPTNH KIEDDFDIFD KIAKAEWDTL FFFYGVILAV GGLGFIGYLG
MTSAFMYGEL GPTTANILVG VMSAIVDNIP VMFAVLTMNP AMNETQWLLV TLTAGVGGSL
LSIGSAAGVA LMGQARGFYT FFSHLKWTPA IALGYGASIW VHFLINS
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