Gene Sde_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0057 
Symbol 
ID3965365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp70739 
End bp71527 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content47% 
IMG OID637919116 
Productzinc transport system permease protein 
Protein accessionYP_525533 
Protein GI90019706 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGTT TTTTATTGTT GTCTTTAATT GCCGGTAGCG TTATTGCTTT AACCGCAGGC 
CCACTGGGTG CCTTTGTGGT GTGGCGACGT ATGGCTTACT TTGGCGATAC CCTCGCCCAC
TCTGCACTAC TGGGCGTAGC GTTTGGCATA GTGTTAAACA TTAGCCCGGT TATAGGCATT
GTGTTGGCCA GTTCGGCCAT TGCCCTGTTG TTGTGGTGGA TGCAAAAAAG CACCACCCTC
GCCAACGACA GCCTGCTTGG TATTCTTAGC CATTCGGCGC TGGCATTGGG CTTGGTGTGT
GTGGGTTTAT TTTCGAATAG CCGGATAGAT TTATACGGTT ATTTATTTGG CGATTTACTT
ACCGTAAATA TGCAAGATAT AGCCGTAGTG TGTGCGGCGG CCAGCGTTAT TTTAGGGCTG
GTGTGCTTTT TTTGGCGAAG CCTATTAATG ATAGCCATAG ACGAGAGCTT GGCAAAAGTA
GAAGGCTTAG CGGTAGAAAA ATTGCGCTTA ATGCTAATGT TGTTAATGGC TTTGTTAATT
GCCATTGCTA TGAAGGCGGT AGGCATTTTA TTAATTACCG CGCTGTTAAT TATTCCACCC
GCTGCCGCAC GCAAATTAAC AAGCTCGCCC GAGGCCATGG CCATTTGCGC AGCCTGCATT
GGTGTAGCAT CTGTGTGGCT TGGGTTGGCA GCCTCTTATT TTTTAGATAC TGCGCCCGGG
CCATCTATCG TTATTGCCAG CACCATCGCG TTTATTATTA CTTCGGCAAG CGCTGCAATT
AAGCGCTAA
 
Protein sequence
MISFLLLSLI AGSVIALTAG PLGAFVVWRR MAYFGDTLAH SALLGVAFGI VLNISPVIGI 
VLASSAIALL LWWMQKSTTL ANDSLLGILS HSALALGLVC VGLFSNSRID LYGYLFGDLL
TVNMQDIAVV CAAASVILGL VCFFWRSLLM IAIDESLAKV EGLAVEKLRL MLMLLMALLI
AIAMKAVGIL LITALLIIPP AAARKLTSSP EAMAICAACI GVASVWLGLA ASYFLDTAPG
PSIVIASTIA FIITSASAAI KR