Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0057 |
Symbol | |
ID | 3965365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 70739 |
End bp | 71527 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919116 |
Product | zinc transport system permease protein |
Protein accession | YP_525533 |
Protein GI | 90019706 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGTT TTTTATTGTT GTCTTTAATT GCCGGTAGCG TTATTGCTTT AACCGCAGGC CCACTGGGTG CCTTTGTGGT GTGGCGACGT ATGGCTTACT TTGGCGATAC CCTCGCCCAC TCTGCACTAC TGGGCGTAGC GTTTGGCATA GTGTTAAACA TTAGCCCGGT TATAGGCATT GTGTTGGCCA GTTCGGCCAT TGCCCTGTTG TTGTGGTGGA TGCAAAAAAG CACCACCCTC GCCAACGACA GCCTGCTTGG TATTCTTAGC CATTCGGCGC TGGCATTGGG CTTGGTGTGT GTGGGTTTAT TTTCGAATAG CCGGATAGAT TTATACGGTT ATTTATTTGG CGATTTACTT ACCGTAAATA TGCAAGATAT AGCCGTAGTG TGTGCGGCGG CCAGCGTTAT TTTAGGGCTG GTGTGCTTTT TTTGGCGAAG CCTATTAATG ATAGCCATAG ACGAGAGCTT GGCAAAAGTA GAAGGCTTAG CGGTAGAAAA ATTGCGCTTA ATGCTAATGT TGTTAATGGC TTTGTTAATT GCCATTGCTA TGAAGGCGGT AGGCATTTTA TTAATTACCG CGCTGTTAAT TATTCCACCC GCTGCCGCAC GCAAATTAAC AAGCTCGCCC GAGGCCATGG CCATTTGCGC AGCCTGCATT GGTGTAGCAT CTGTGTGGCT TGGGTTGGCA GCCTCTTATT TTTTAGATAC TGCGCCCGGG CCATCTATCG TTATTGCCAG CACCATCGCG TTTATTATTA CTTCGGCAAG CGCTGCAATT AAGCGCTAA
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Protein sequence | MISFLLLSLI AGSVIALTAG PLGAFVVWRR MAYFGDTLAH SALLGVAFGI VLNISPVIGI VLASSAIALL LWWMQKSTTL ANDSLLGILS HSALALGLVC VGLFSNSRID LYGYLFGDLL TVNMQDIAVV CAAASVILGL VCFFWRSLLM IAIDESLAKV EGLAVEKLRL MLMLLMALLI AIAMKAVGIL LITALLIIPP AAARKLTSSP EAMAICAACI GVASVWLGLA ASYFLDTAPG PSIVIASTIA FIITSASAAI KR
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