| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0043 |
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| Symbol | |
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| ID | 3965351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 48155 |
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| End bp | 49339 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919102 |
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| Product | putative cytochrome oxidase assembly protein |
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| Protein accession | YP_525519 |
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| Protein GI | 90019692 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.484274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA AAAAGCTCGT GTACCGTCTT TCTTGCTTGG CCTTTGCGGT TGCCGCAGTA
GTGGTATTGT TGGGTGCATT TACACGCTTG GTGGATGCGG GTTTAGGCTG CCCAGATTGG
CCTACGTGTT ACGGCCATGT ATGGGTGCCC ACCAGCGAAG CCGATATTGC AAAAGCTAAC
GAAAACTTTA GTCATGCACC GGTAGAAACC CACAAAACCT GGCCAGAGCA AATTCACAGA
ATATTTGCCT CAAGCTTAGG GCTAATAATT TTGGGTATTT TCGCTGTAGC ACTGGTTGGT
AGAAATGAAA AAACGCCGTG GCGCTCGGTA GTATTGCTCT TAGGTGTATT GGTAGCAGGT
ACGGTGGGTA GAGTAATAAT AGGCGATAAG CTCGACCCAC TTTTACTGTT ATTTGTTGCG
TGTTATTTTT TAAACCTGTG CCGCCTAAAT TGGATGCAAC CTACAGCGAG CAACACCTCT
AGCATGCCTT TTAAATTACC GGCACTGCTC GCGGGGCTGG TTATATTACA GGGCCTGTTT
GGTATGTGGA CGGTAACCCT CAATCTTTGG CCACAAGTTG TAACGGCGCA CCTATTGGGT
GGCTTCACTA CTCTGGCATT CATTTGGCTG CTTATTCAGC GTTGCGGCAA TTACACTTGG
CAGCTTAACA GCGCGGTATT AAGTGAATTA AACACCATTA AGGTATTGGC TTTAATAGGT
TTGGTTGTTG TGGCATTGCA AATAGCGCTA GGTGGTTGGA CAACCTCAAA CTATGCGGCG
CTAGCCTGTG CGGACTTTCC CAAGTGCCAT AACACTTGGT TACCCGAAAC TGACTTCGCC
CAAGGCTTTA ATTTTTTACA GCATGTAGGG CCAAACTATT TAGGTGGCGT AATGGACAAT
GCCGCTCGCA CGGCGATCCA TTTTAGCCAT AGGTTAGGCG CCCTGTTAAC GTTTGTGGTT
ATGGCCTTAT TAGCCTTTAG ATTATTTCGG GTAGAGTCAC CACTGGCTAA GCGATGGGCT
GTAATAGTCA TTTCGGGTAC GCTTTTACAA GTAGCGTTGG GCATAAGTAA CGTTGTTTTT
GCGCTACCAC TAGCCATCGC CGTCGCCCAT AACGCAGGTG GTGCAGCTTT ACTGCTAATA
CTGGTAACCT TGAACCACAG GTTGCGCACG GCGAAGGCCA GCTAA
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| Protein sequence | MKNKKLVYRL SCLAFAVAAV VVLLGAFTRL VDAGLGCPDW PTCYGHVWVP TSEADIAKAN
ENFSHAPVET HKTWPEQIHR IFASSLGLII LGIFAVALVG RNEKTPWRSV VLLLGVLVAG
TVGRVIIGDK LDPLLLLFVA CYFLNLCRLN WMQPTASNTS SMPFKLPALL AGLVILQGLF
GMWTVTLNLW PQVVTAHLLG GFTTLAFIWL LIQRCGNYTW QLNSAVLSEL NTIKVLALIG
LVVVALQIAL GGWTTSNYAA LACADFPKCH NTWLPETDFA QGFNFLQHVG PNYLGGVMDN
AARTAIHFSH RLGALLTFVV MALLAFRLFR VESPLAKRWA VIVISGTLLQ VALGISNVVF
ALPLAIAVAH NAGGAALLLI LVTLNHRLRT AKAS
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