Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0034 |
Symbol | |
ID | 3968167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 37816 |
End bp | 40122 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919093 |
Product | hypothetical protein |
Protein accession | YP_525510 |
Protein GI | 90019683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAA AACTAACCCA GTCGATCAAG TGGTTGGCAC CCATGTTAAT GGCCATGCAG GTATCAACGG CGTATGCAGC AGACCCAGTT TCTGTTGAAG CGTCCACCGA TGATGGCAAT GGGCCTAGCA ACACATTAGA TAATGATTTA TCCACGCGTT GGTCTGCCAA TGGTAGCGGC CAGTGGATTC GCTACAACCT TGGCACTAGC TACAATATTG AATCTTTAGA TATTGCGTTT TACAAAGGCG ATCAGCGCAA CGCGAGCTTT GACGTTTTAA CATCAGGAGA TGGCCAAAAC TGGAATACCG TATTCAGCGG TACGCAGCCA AGCAGTACGG CAGATCAACA AACTATCTCC CTATCTGACT CGATAGGTCA GTACGTACAA ATTGTTGGTT ACGGCAATTC ATCTAACAGC TGGAACAGTA TCACCGAAGT TGATATAGAT ACTTCAGTGG TTGATGACGG CAATACCGGT GGCGGTAGTT TAAGTGCAAG CGCCAGTGCC GATGATGGCA ATGTGGCCGG TAACGTACTT GATGGCGACC TAAACACCCG TTGGTCCGCC AATGGCAATG GCCAGTGGTT GCGCTTAGAT CTTGGTGCTA CGCAAGTGGT TGGCACTGTA AATATTGCTT TCTTTAAAGG TAATCAACGC AGTGCTAATT TTGATATAGA AGCCAGTACC GATGGTTCGA ACTGGACCCG TGTAGTGGCT GGTGCACACA GTTCAGGTTC TTCTGTAAGC TTGGAGCCTT TTTCATTCTC ACCTGTTAAC GCGCGCTACA TTCGCTACGT TGGTTATGGC AACAGTGCCA ACAGCTGGAA CTCAATCACC GAGATGAGTG TTGCAGCTAG TGGTGGTTCT AGTAGTTCGA GCAGTTCTTC AAGCAGCTCA TCGAGTTCAT CTAGCTCAAC CAGTTCATCT AGTTCAAGCA GCTCTTCAAG TTCCTCGTCT AGCTCTTCTA GCAGTTCGTC TAGTTCTAGT AGCTCAAGCA GTTCTTCAAG TTCTAGCTCG TCGAATGGCG GTGTACCAGG TAATACTTAT ACCGCAACAC CCGATTCGCT AAACGATGTA TTGGCGACGG TGTCTGGTGG CGACGAAATT GTGGTTACTG GCTCCGGTGA AATATCGATA AAAAATATTA GCTTTAATTC ACCTGTGTTA ATTCGCGCAA ACTCTATTGG CGGCACCACG TTAACCAATG CAACCCTTAC TAACTGTAAT AACATTAGTT TGCAGGGTTT TGTGTTTGGT CCTAACGACG AGAGCACGCT GTTAAAGATT GTGAACTCCA CCAACATCAA AATATTGCGC AACTTGTTTG ATCACAAAAA CGTTACCGAA AGCCAAACGT CTTTAGTGAT GACTCAAGCC AGCCAATATA TTGAAATTGC TTACAACGAG TTCCGCGATA AAAATTTAGG TGACCGCAGT GGTACCAAAA TTACGGGTAG CTACATTAAA ACCCAGTTCG ACGACCCGTT GATGAGTAAA AATATTCACA TCCATCACAA CCACTTTAAA AACATTGCGC CATACCTTGT GGACGGTGTA CCAGCGGGTG ATTCGGATCG TGAAGTAATT GCAATGGGTA TTGCCGATTC GCAAGACGTA GTAACCAACA ATATTGTTGA GTACAACCTT TTCGAGAACT GCGATGGCGA AAACGAAATT GTTACAGTTA AAACCTCTAA CAATATTTTC CGCTACAACA CCTTCAAAAA CTCCATGGGT TCCTTGTCGT TCCGTTTAGG TTCGAACAAC CAAGCTTATG GCAACTATTT TTACGGTGTA GGTTCTGGTG CGTCGGTTGC TAATGATAAC TATGAAACAG GCGGTGTGCG CGTGTACGGC GCGGGTCATA CTATTCACAA CAACTATATG GAAGGCCTAA CAGGGCTTAG CTGGAGACGC CCAATTTTAG TGGATTCGGG TGATACCTCA GAAAGCTCGG GTAACGATAG CCACGAAGTG TCTACTAATG TGCAGGTTTA CGATAACGTT ATTGTTAATA GTTTAGGTGG CGGCATTCAT GTAGGCGGCG ACAAGTACAG CAAAATGCCC ACCAATATCA CCATTACTAA CAACGTAGTT AGCGGTAGTG ACGGTATATT ATTTAACAAT CACGCTAATC AATCTTCTAA CACTTGGTCG GGCAACCAGG CTTACGCAAC AGGTTCTGCT GTAGCGGTTG CTGGCGGTTC ATTAGGTGCT TCGGAAGTTG TTGTGTTATC TAGCGAGCCA ACTATTAATA AGCCAACACC GCTTACCGCA AGTGATGTAG GCCCAAGTGC GCCTTAA
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Protein sequence | MSTKLTQSIK WLAPMLMAMQ VSTAYAADPV SVEASTDDGN GPSNTLDNDL STRWSANGSG QWIRYNLGTS YNIESLDIAF YKGDQRNASF DVLTSGDGQN WNTVFSGTQP SSTADQQTIS LSDSIGQYVQ IVGYGNSSNS WNSITEVDID TSVVDDGNTG GGSLSASASA DDGNVAGNVL DGDLNTRWSA NGNGQWLRLD LGATQVVGTV NIAFFKGNQR SANFDIEAST DGSNWTRVVA GAHSSGSSVS LEPFSFSPVN ARYIRYVGYG NSANSWNSIT EMSVAASGGS SSSSSSSSSS SSSSSSTSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SNGGVPGNTY TATPDSLNDV LATVSGGDEI VVTGSGEISI KNISFNSPVL IRANSIGGTT LTNATLTNCN NISLQGFVFG PNDESTLLKI VNSTNIKILR NLFDHKNVTE SQTSLVMTQA SQYIEIAYNE FRDKNLGDRS GTKITGSYIK TQFDDPLMSK NIHIHHNHFK NIAPYLVDGV PAGDSDREVI AMGIADSQDV VTNNIVEYNL FENCDGENEI VTVKTSNNIF RYNTFKNSMG SLSFRLGSNN QAYGNYFYGV GSGASVANDN YETGGVRVYG AGHTIHNNYM EGLTGLSWRR PILVDSGDTS ESSGNDSHEV STNVQVYDNV IVNSLGGGIH VGGDKYSKMP TNITITNNVV SGSDGILFNN HANQSSNTWS GNQAYATGSA VAVAGGSLGA SEVVVLSSEP TINKPTPLTA SDVGPSAP
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