Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0031 |
Symbol | |
ID | 3968164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 34108 |
End bp | 36165 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919090 |
Product | oligopeptidase A |
Protein accession | YP_525507 |
Protein GI | 90019680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACC CTTTGTTAAA TCATCAGAAC TTGCCAGCAT TTTCTACTGT TAAGCCTGAA CATGTGGTGA ATGCAGTAGA AACAATTATT AAAGAAAATG AGCAAACTTT AGCCGAAGTG CTTGCGCAAG AGGGTACGCC AACCTGGGAA ACCCTAGTGG CACCCTTAGA TGAAAAAAGC GATAAGTTAG ACAAGGCTTG GGCGGTAGTG AGCCATCTAA ACTCAGTAGC TAACAGTGAT GAGTTGCGCG AAGCTTACGA GGCGGGGGAG CAATTGCTTA CCCAGTACTA TGCCAAAATA GGTCAAAACA AAGCGCTTTA TCAAGCCTAC GAGGCGCTGG CCCAAGAGCC ATATTTTAGC AGCCTCAGCC AAGCCCAAAA GCAAACTGTA GAAAATGCGC TGCGCAATTT TCGCTTAGCG GGTGTTGCTC TAGAGGCCGA ACAGCAAGCG CGTTTTACCG AAATTCAATC TGAGCTATCT AGCCTAACTA CACAGTTTGC CAACAACGTG ATGGATGCAA CGCAAGGTTG GTACAAACAG GTAACCGACG AAGCACACTT AGCAGGTATT CCTGCAATGG CGAAAGAAGC TGCGGCCAAT GCAGCCAAAA AGAAAGATGT GCAAGGCTGG GTATTCACAC TTGATATCCC GTCTTACTTG GCAGTAATAA CTCACGCCGA TAACCGAGCG CTGCGCGAAG AAATGTACCG CGCGTTTGCC ACCCGCGCCT CGAGCGAAAG CCCAGTAGCG GATGAGCAAA AAGCAAAATG GGACAACACC CCGCTGATAG AAAAAATTCT TGCTCTGCGC TTAGAAAAAG CGCAACTGTT AGGGTTTAAT AATTATGCCG AAGTATCTAT TGCTCCCAAA ATGGCAGAGA GCACCGAGCA AGTAATTGGC TTTTTAGAAG ACCTAGCCGC AAAGGCCAAA CCACAAGCCG CAAAAGAGAA AGCTACACTT GAGCAGTTTG CTAAAACCGA ACTCGGCCTA GATGAATTAA ACGCATGGGA TGTGGCTTAC GCGTCGGAAA AACTAAAAGA AAAAACCTTT AACGTTTCAC AAGAAGCATT GCGTGAATAT TTTCCGCTAC AAAAAGTACA GGCGGGTATG TTTACGTTGG TAGAGAAACT ATTTGATGTG CGTATTCAAG AAAATACCGA ATCAGACACC TACCACCCAG ATGTAAGTTA TTTCGATATT TATCGCAACG ATACGTTAAT TGCCAGTTTT TACTGGGATT TATTCGCCCG CGAGAAAAAA CGCGGTGGCG CGTGGATGGC CGATGGCCGC ATTCGTCGCA AAACGGCAGA GGGCTTGCAA AAACCGGTTG CATTTTTAAC CTGTAATTTT AATGGCCCCG TTGGCGATAA GCCTGCGTTA TTAACCCACG ACGAAGTGAC CACATTATTC CATGAGTTTG GTCACGGCTT GCACCACATG CTTACCCAAA TAGATATCCC AGCAGTAAGC GGCATTAATG GCGTAGCGTG GGATGCCGTT GAGTTGCCCA GTCAATTTAT GGAAAACTTC TGCTGGGAAA AAGAAGTACT GCCGTTAATT TCTGGCCACT ACGCCACCAA CGAACCTTTG CCAGAAGACA TGCTTAATAA CATGATTGCC GGCCGTAACT TTCAATCGGC TATGCAAATG GTACGTCAGT TAGAGTTTTC TTTATTTGAT TTTGTGTTGC ATAAAGATTT TGGCACTGAA CAATTTAGCG ATGTGCAAAG TGTGTTAGAT ACTATTCGCG ATAAAGTTTC GGTAATTGTT CCACCCAGCT TTAATAAATT CCAAAACAGT TTTACACATA TTTTTGCCGG TGGTTATGCG GCGGGTTATT ACAGCTATAA GTGGGCAGAG GTGTTATCGG CCGATGCGTT CGCGGCGTTT GAAGAAGAAG GTGTACTTAA CGAAGCAACC GGCAAGCGCT TTTTGCACAG TATATTAGAG CAGGGCGGTT CACAGCAGGC GATGGTATTG TTTGAGAATT TCCGCGGTAG AAAACCCAGT GTGGACCCGC TTTTGCGCCA TTCTGGCATT GTAGAGGTAG CAGCGTGA
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Protein sequence | MSNPLLNHQN LPAFSTVKPE HVVNAVETII KENEQTLAEV LAQEGTPTWE TLVAPLDEKS DKLDKAWAVV SHLNSVANSD ELREAYEAGE QLLTQYYAKI GQNKALYQAY EALAQEPYFS SLSQAQKQTV ENALRNFRLA GVALEAEQQA RFTEIQSELS SLTTQFANNV MDATQGWYKQ VTDEAHLAGI PAMAKEAAAN AAKKKDVQGW VFTLDIPSYL AVITHADNRA LREEMYRAFA TRASSESPVA DEQKAKWDNT PLIEKILALR LEKAQLLGFN NYAEVSIAPK MAESTEQVIG FLEDLAAKAK PQAAKEKATL EQFAKTELGL DELNAWDVAY ASEKLKEKTF NVSQEALREY FPLQKVQAGM FTLVEKLFDV RIQENTESDT YHPDVSYFDI YRNDTLIASF YWDLFAREKK RGGAWMADGR IRRKTAEGLQ KPVAFLTCNF NGPVGDKPAL LTHDEVTTLF HEFGHGLHHM LTQIDIPAVS GINGVAWDAV ELPSQFMENF CWEKEVLPLI SGHYATNEPL PEDMLNNMIA GRNFQSAMQM VRQLEFSLFD FVLHKDFGTE QFSDVQSVLD TIRDKVSVIV PPSFNKFQNS FTHIFAGGYA AGYYSYKWAE VLSADAFAAF EEEGVLNEAT GKRFLHSILE QGGSQQAMVL FENFRGRKPS VDPLLRHSGI VEVAA
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