Gene Sde_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0030 
Symbol 
ID3968163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp33407 
End bp33964 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID637919089 
Productanhydrase family 3 protein 
Protein accessionYP_525506 
Protein GI90019679 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCA CAGTGGCAAA TTCCAACCCA GTACGCACTT TTAAAAATAT TACCCCCAGC 
CTTGGTGAGC GAGTGTTTGT CGACCCAGCT GCTGTGGTTA TCGGCGATGT GCATTTAGGT
GAAGACGCTT CGGTTTGGCC CTGTGCGGTA ATACGCGGTG ATATGCACCG TATTCGTGTG
GGCGCGCGCA CCAGCGTGCA AGATAACGCC ATTTTGCATA TTACCCACGC CAGCAGCTTT
AACCCCGACG GCTGGCCGCT AATTATTGGC GACGATGTAA CGATTGGCCA CGGCGCGTGT
CTACATGGGT GTACAGTTGG CAATAAAGTG CTGGTAGGTA TTGGTGCAAC GGTATTAGAC
GGCGCCATTG TGGAAGATGA AGTCATTATC GGCGCAGGCA GCTTAGTGCC ACCCGGCAAG
CGCTTACAAA GTGGCTTCCT GTATGTGGGC AGTCCCGTCA AGCAAGCTCG TCCACTTAAA
GATTCTGAAA AAGCCTTTTT CGCCTACTCA GCGCAAAATT ATGTGAAGTT GAAAGATGAA
TATTTAGGGG ATAGCTAA
 
Protein sequence
MEATVANSNP VRTFKNITPS LGERVFVDPA AVVIGDVHLG EDASVWPCAV IRGDMHRIRV 
GARTSVQDNA ILHITHASSF NPDGWPLIIG DDVTIGHGAC LHGCTVGNKV LVGIGATVLD
GAIVEDEVII GAGSLVPPGK RLQSGFLYVG SPVKQARPLK DSEKAFFAYS AQNYVKLKDE
YLGDS