| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0023 |
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| Symbol | |
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| ID | 3968156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 26674 |
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| End bp | 27873 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919082 |
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| Product | filamentous haemagglutinin-like protein |
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| Protein accession | YP_525499 |
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| Protein GI | 90019672 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTAACCT TAATAAAAGG TATTCTCAAC GGCTGTAAAC CAATCACGGA TGAAAATATG
CTTAGTTCAA TTGAAGAGCT CATACTGTTT ACTCGCCTAC CAGGTGTAGG TGCGGCCACA
TACTGGCAGT TGTTAGATCG CTTTCCTAGC ATACACTCTG CGCTGCAAGC CTCACCCGAA
GCACTTAAAC CATTTCTCTC GCAAGAAGCC CTCGATACCC TAGCGTTGGT ACGCAGCCAA
AAATCTGCCT CTATGGCTGT GCAGCAGGTG CAGCGGGATA TGGATTGGCT GCAAAAAAAC
GACATTACCC TAGTAGATAC TGACCACACC GCCTACCCAG AGTTACTGCG CGAAATAAAA
CGTACGCCGC CATTGCTGTA CGTCAAAGGT TGCCCGGCGA GTTTAAACTT TCCTCAGGTG
GCCATTGTGG GCAGCCGCAA GCCCACGCCT GCTGGCCGCG ACACTGCTCA GGCCTTTGGC
TCCGATTTGG CAAAATCGGG TTTTACCATT ACCAGTGGCT TGGCTATGGG TATTGATGCC
GCCGCGCACG AGGGCGCCGT TAAAGTTAAA GGCCGTACCA TTGCAGTAAT TGGTACCGGC
ATAGATAGCG TTTACCCCCA GCGCAATAGC GCATTAGCTA GCGAAATTAT TGCTAACGGT
GGTGCAATAG TAAGTGAGTT CCCCTTGGGT ACCGACCCAC AACCGCAAAA CTTTCCACAG
CGAAACCGTA TAGTTAGCGG TTTAAGTTTT GGTGTGGTGG TGGTCGAAGC GGCGGTAAAA
AGTGGCTCTC TTATCTCTGC GCGCTATGCA TTGCAGCAAA ACAGAGAGTT GTTTGCGGTG
CCTGGCTCCA TCCACAACCC TTTAAGTCGT GGTTGCCACG CATTAATAAA AGAAGGCGCC
AAGTTGGTAG AAACCTCGCA AGATATTGTC GATGAGCTAG GCGGCTTCTT ATCGCGCCAG
CGCGATTTAT TAGATATTTA CAAGCAGCCC GCAGAAAATA GTTTGCCAAA ACACGACGAG
CTTATAGCTA ACGATTTAGA AGACGATGTA CTGGCAAAAC TAGATTACAG CCCAACCCCC
ATCGACGCTT TAGCCGAGCG CACCAAAAAG CCCATTGGCG AAGTTATGTC TTGTTTGCTC
ACCATGGAGC TAAAAGGCTT AGTGGCCAAC TTGGGTGCAG GCTATATGCG GTTGCGCTAG
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| Protein sequence | MVTLIKGILN GCKPITDENM LSSIEELILF TRLPGVGAAT YWQLLDRFPS IHSALQASPE
ALKPFLSQEA LDTLALVRSQ KSASMAVQQV QRDMDWLQKN DITLVDTDHT AYPELLREIK
RTPPLLYVKG CPASLNFPQV AIVGSRKPTP AGRDTAQAFG SDLAKSGFTI TSGLAMGIDA
AAHEGAVKVK GRTIAVIGTG IDSVYPQRNS ALASEIIANG GAIVSEFPLG TDPQPQNFPQ
RNRIVSGLSF GVVVVEAAVK SGSLISARYA LQQNRELFAV PGSIHNPLSR GCHALIKEGA
KLVETSQDIV DELGGFLSRQ RDLLDIYKQP AENSLPKHDE LIANDLEDDV LAKLDYSPTP
IDALAERTKK PIGEVMSCLL TMELKGLVAN LGAGYMRLR
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