| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0022 |
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| Symbol | |
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| ID | 3968155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 25495 |
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| End bp | 26553 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919081 |
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| Product | hypothetical protein |
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| Protein accession | YP_525498 |
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| Protein GI | 90019671 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.124597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ACTTGCTTGG CGTGCTTTCT GCCATCGCCT TATCTGCGCA AGTCGCCACT
CAAGCCTACG CGGAACAGCC TCAACTTCGC GATGAGATCC CAGCGACCCA TACAGTAGTT
AAAGGGGACA CGCTGTGGGA TATTTCCGCG ACCTTCCTTA AGAATCCTTG GATGTGGCCA
GAAATTTGGC ATGTAAATGC CCAAATTGAA AACCCGCACC TTATCTACCC TGGCGACGTA
ATTCGCTTGA TCTATGTAGA TGGCAAACCA CGTTTAACGC TCGATACCAG CGGCCGCGTT
TATAAAATGT CGCCTCAGGC GCGCGTTTTA TCTGCTGAAG AGGCCATTGA AACGATCCCG
CTCGAAAAAA TTAACAGCTT TTTGTCACGC AGCCGCGTGG TTGGCGAAAA CGATTTTGTA
GGCGCGCCCT ATGTGCTTTC TGGTTTAGAT CAGCACTTAT TGGTAGGCGC TGGCGATAAA
ATCTACGGTC GCGGCAATTT TGCCGAGCGC GGCACGGTGT ACGGTATTTA CCGTCAGGGT
GAAATCTTTA AAGACCCAGA AACCAAAGAG ATTTTGGGTG TACAGGCGCT CGATATCGCT
ACTGCATCAT TAATGCGTGT AGAAGACGAT AACGATGCAA AAGACGATAT TGAAATTGGC
ACCTTAAGTG TTTCTCGCAC CACAGAAGAA GTGCGTATCG GCGACCGCTT CTTGCGCCAA
GAAGAACGCC CCATCGACTC GACTTTCTTC CCATCGGCCC CTAACACCGA AACCGAAGGT
GTCATTTTGG CGGTTGAAGG CGGTTTAACC CAAGTGGGTA AAATGGACGT TGTTGTTATA
AACCGCGGCG AGCGCGAAGG CATGACAGCA GGCACGGTAC TTGCCGTTTA CAAGCGTGGC
GGTGTTATAC GCGACCGAGT GAGTAAAGAT AGAGTAACTT TGCCCGATGA GCGTGCCGGT
GTTTTGATGA TTTTCCGCAC CTTCGAGAAA GTAAGCTTTG GCTTAATATT AGAAGCGGAG
CGCGGCATTT CGGTAAAAGA TAAAGTACGC AACCCATAA
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| Protein sequence | MKKYLLGVLS AIALSAQVAT QAYAEQPQLR DEIPATHTVV KGDTLWDISA TFLKNPWMWP
EIWHVNAQIE NPHLIYPGDV IRLIYVDGKP RLTLDTSGRV YKMSPQARVL SAEEAIETIP
LEKINSFLSR SRVVGENDFV GAPYVLSGLD QHLLVGAGDK IYGRGNFAER GTVYGIYRQG
EIFKDPETKE ILGVQALDIA TASLMRVEDD NDAKDDIEIG TLSVSRTTEE VRIGDRFLRQ
EERPIDSTFF PSAPNTETEG VILAVEGGLT QVGKMDVVVI NRGEREGMTA GTVLAVYKRG
GVIRDRVSKD RVTLPDERAG VLMIFRTFEK VSFGLILEAE RGISVKDKVR NP
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