| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0019 |
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| Symbol | |
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| ID | 3968838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 22285 |
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| End bp | 23622 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919078 |
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| Product | Sun protein |
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| Protein accession | YP_525495 |
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| Protein GI | 90019668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAAAT CGCCTAACAA ACGCATTACC AACCTTCGCG CCCTTGCCGC TATGACCTTA
GCACCGGTTA TTAGCGGCAG CCGCTCGCTC TCGACCATTT TAGATAAAGC CTTGGATGCA
GTAGAGCCAA AAGAAAGGCC GCTAATGCAA ACACTGTGCT TAGGCAGCTT GCGTGTATTC
CCTAAAATTG ACCTAATTGC GCGAAAGTTA CTGCAAAAAC CATTTAAAAG TCGCGATAAC
GACGTATATG CGCTAATTGT GCTGGGTATT TACCAAATGG ATTACCTGCG CACCCCCGAC
CACGCGGCCA TTGGCGAAAC AGTAGAAGCC GCCAAAGCGC TAAACAAGCC TTGGGCCAGC
AAGCTTATTA ATGGTGTGCT GCGCAATTAC CAGCGCGAGA AAGTGGCCCT GCAACACAAG
CTAAACGGCA GCATGGCTTT TCAACACGCC CACCCACAGT GGTTTATCGA TTTAGTGCGC
GCCGACTGGC CGCAAGATTG GCAAGCTATT TTGGCAGCTA ACAACCAACA GCCACCAATA
ACATTGCGCG CCAATAAACG TCACTGCGAT CAAAAAACAC TTTTAGAAGC GCTGCACAAG
GCCGAAGTTG GCGCTCACTT ATGTGAGTAT TCTCGCGATG GAATAACCTT GGAAGGCGCG
TCAGATATCC CCGCCCTGCC CGGCTTTAAT GAAGGCCACT TTAGCGTGCA AGATGAAGCC
GCCCAGCTTT CTGCCAGCTT GCTAGATCTT CAAGCCAACC AGCGAGTGCT CGATTGCTGC
TCCGCGCCCG GCGGCAAAGC AGGCCACATA TGTGAGCAGG CAAACAACAT AGATTTAACC
TGTTTAGAGT CTGATGCCAG CCGCATGCCA AGGGTTGAGC AAAACCTTGC CCGCCTCGGC
CACACGGCTA AATTAATAGT AGAAGATGCC AACGAGGTGG ATAGTTGGTG GGATGGCGTG
CCCTTCGATC GCATTCTATT GGATGCCCCC TGCTCCGCCA CAGGGGTTAT CCGTCGCCAC
CCAGATATAA AACTACTGCG CCGCCCTTCT GATCTTGCTA AGCTTGCCCA ATTACAAGCG
CAGATCTTGC GCAGCGTATG GCGTACCTTA GCGCCTGGGG GCAAACTGCT TTACGCCACA
TGTTCGGTGC TAAAGCAAGA GAACGAAAAC ATCGTTAGCC ATTTTGTAAG CGAACAAAAT
GATGCGCGAC ATATCCCTCT CGATAACAAT CAACCCGTAA CCTGGGGAGT TGAACGTCCA
TTTGGCCGAC AACTGTTCCC ACAGGAAAAC GGGCACGACG GGTTTTATTA CGCGTTACTA
GAAAAAACCC GCGACTAA
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| Protein sequence | MAKSPNKRIT NLRALAAMTL APVISGSRSL STILDKALDA VEPKERPLMQ TLCLGSLRVF
PKIDLIARKL LQKPFKSRDN DVYALIVLGI YQMDYLRTPD HAAIGETVEA AKALNKPWAS
KLINGVLRNY QREKVALQHK LNGSMAFQHA HPQWFIDLVR ADWPQDWQAI LAANNQQPPI
TLRANKRHCD QKTLLEALHK AEVGAHLCEY SRDGITLEGA SDIPALPGFN EGHFSVQDEA
AQLSASLLDL QANQRVLDCC SAPGGKAGHI CEQANNIDLT CLESDASRMP RVEQNLARLG
HTAKLIVEDA NEVDSWWDGV PFDRILLDAP CSATGVIRRH PDIKLLRRPS DLAKLAQLQA
QILRSVWRTL APGGKLLYAT CSVLKQENEN IVSHFVSEQN DARHIPLDNN QPVTWGVERP
FGRQLFPQEN GHDGFYYALL EKTRD
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