Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0007 |
Symbol | |
ID | 3968826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 9715 |
End bp | 10098 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637919066 |
Product | hypothetical protein |
Protein accession | YP_525483 |
Protein GI | 90019656 |
COG category | [S] Function unknown |
COG ID | [COG3296] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.146803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.457829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGT TACCAACATC GTCGAATTCA GAATTTAAAC CGTGGGGTAT GGAAGAAAAC GTATTTATAA TGTTGATGCA TTTATCTCAG CTTACTGGCT TTATTATTCC ATTCGGCGGC CTAATTTTAC CGATTGTTAT GTGGGCAACC AATAAAGACC AAAGCGAGAA TATTAATAAA CACGGTAAAG TAGTGTTGAA CTGGGTAATT AGTTCTACTA TTTACTGCGT TGTAGCCTTT ATGCTAATTG CTCTAGTAAT TGGTATACCG CTTTTAATTG GTGTGTGTAT TACTAGCTTG GTGTTTATTG TTATTGGCGC TATTAAAGCA AACAATGGCG AGCTTTGGCC CTACCCAATT AGCATCAAAT TTTTTAAAGT GTAA
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Protein sequence | MSELPTSSNS EFKPWGMEEN VFIMLMHLSQ LTGFIIPFGG LILPIVMWAT NKDQSENINK HGKVVLNWVI SSTIYCVVAF MLIALVIGIP LLIGVCITSL VFIVIGAIKA NNGELWPYPI SIKFFKV
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