Gene Sde_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0005 
Symbol 
ID3968824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp7034 
End bp7507 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID637919064 
Producthypothetical protein 
Protein accessionYP_525481 
Protein GI90019654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.251807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.30014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA AATACGAGTT AGTAGGTTTA CCTAGCATCA AGGCAGCCGC TCTGCATTTA 
ACTATCCCCA GAAGCGATGT AAGTGAAGAA ATGGGGCCGG CTGTGAATGC GGTGTTAGGT
GCTATTACTA ATGCAGGCTT GTCGCCTGTT GGCCCAATGT TCGCCTACCA TCTTTCGGTG
TTTGATACGC ATTTTGATTT TGAAGTTGGT TTTCCAATAG CCGATGATTT AGCACCAGTT
GGAAAGGTAA GAACCATTGA CTTGCCCGCG GTAAGTGCAT TTAAAACAAC CCATATTGGC
CCATACACGG GGCTTTACGA GGCGTGGACT GCTTTCGGTG CCGAGTATAA AGCTAGGTAC
CCGCAGCAAA CCCGCAAGCA ACTATTTCGG GAAATCTATC GCGTGGGGCC AGAGACTACT
TTAAATGAGA CTAAATGGGA GACAGATCTA TTTATCCCTA TTTCTCACAG CTAA
 
Protein sequence
MSNKYELVGL PSIKAAALHL TIPRSDVSEE MGPAVNAVLG AITNAGLSPV GPMFAYHLSV 
FDTHFDFEVG FPIADDLAPV GKVRTIDLPA VSAFKTTHIG PYTGLYEAWT AFGAEYKARY
PQQTRKQLFR EIYRVGPETT LNETKWETDL FIPISHS