Gene Rfer_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4227 
SymbolrplR 
ID3961945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4697792 
End bp4698157 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID637919041 
Product50S ribosomal protein L18 
Protein accessionYP_525445 
Protein GI89902974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0059454 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACCA AAAAAGAGCA GCGTCTTCGC AGGGCGCGTC AAACCCGGAT TCGGATCGCC 
ACTCAAGGTG TTGCCCGTCT GACGGTAAAT CGTACAAACC TGCATATTTA TGCCAGCGTC
ATTTCTGGCG ACGGCGTCAA GGTATTGGCA AGTGCATCCA CGGCAGAAGC CGAAGTGCGC
AAAGCGTTGG GCGGTTCGGG TAAAGGCGGC AACGTTGCCG CTGCCCAAGC TATTGGCAAG
CGTCTGGCTG AAAAAGCCAA GGCGGTTGGT GTTGAAAAAG TTGCGTTTGA TCGTGCAGGC
TTTGCGTACC ATGGCCGCGT CAAGGCGCTG GCAGATGCAG CACGTGAAGC AGGCTTGCAG
TTCTAA
 
Protein sequence
MLTKKEQRLR RARQTRIRIA TQGVARLTVN RTNLHIYASV ISGDGVKVLA SASTAEAEVR 
KALGGSGKGG NVAAAQAIGK RLAEKAKAVG VEKVAFDRAG FAYHGRVKAL ADAAREAGLQ
F